SimpleSearch - Line and FST details
Line specific information
| Line ID | 015C10 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N401378) |
| Segregation Analysis | 50:50:41 |
| Confirmed for Hit | At5g20990 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g20990
| Sequence (A. th genome BLAST matches underlined) | >75-K013040-022-015-C10-35St NAATAGACGTAAGGGACGACGCTTCATCCCCTATCCTTCGCAGACCCTTCCTCTATATAA GGAAGTGCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCC TTCGGTTTAAACTATCAGTGGTTGATAGTCAACTCTACATTATTAATATTTGCATCCATT TTGCCACATTATAACAAAATCGAGAAGGTGAATCTATGGGATCCTCCCTATAGTGAGTCG TATTACTCACCTTCCCCCCATCTCTGTGAGCGACGGGGCTACGGAGCGATCCACATGGGA CTTTCAAACATCATCCGTCCGATGGCCGTTGCGAGAGAACCACTCCATCACTGAGATCAC CCGACGCCCCGCCCATGCTCGCACCCCCAATCGATACGATTTTGAACGCTTGCCCAACCC AGCCCCACGCTCCCGCCACCCGGGCCCCCCCCTCCCGGTCGATCTCCCCCCTTCCGTCGC CCACCAGTCACTCCGCCTTTTTACCTTCACACCCACCCATCCTTTTTGCCCCCCAACATG CCACGCCTACCGCCTCCAACTTCTCCCCACTCGCCTTCTCAGTCCTGCCCATATTCCATG CGTGCTTCTTCTACTTCAGGGCCCCCTACCCCCACTCACATACACTCTTCCTTCTTCAAC ATCGCCCACACCTTACCTATTCCGTTATTCACTCTCACCCCCTAAATCACCCTCACCACT TCTTTTCCTTCTTCCATCTCATCTCCTTTAGACGTCCTCTCTCCATCTCTACAACTCCAT TTCCCCCTTTGTCCATTTTACATCCCCCTTTTCCGTCACACAATCGTCTGGTGTCCCCGA TAAGACTCCCCCCCCCTCTTATTCATGCGGTCTCCTATTTTATCCCCCCGCCATCATATA TTTGTTTTTCC |
| GenBank Accession | AL752584 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:7130100 - go to primer design |
| BLAST e Value | 6e-28 |
| Hit Clone Code (BAC ID) | F22D1 |
| Hit Gene Code | At5g20990 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL752584 [GenBank] |
Gene hit MPO12
| Sequence (A. th genome BLAST matches underlined) | >75-K019122-022-015-C10-8409 AATTCAGTGAGTGATAACTCTGTGACCAGAAACTTCTTACAAGACTTACTTCATTTTGGT CGATTAAAAAGAGTGCACCTATGGGAGTCTCCCTATAGTGAGTACGTTCGCCCATTTGTA TGTGCATGCCAACCACAGGGTTCCCCTCGGGAGTGCTTGGCATTCCGAGCGATAATGACT TCTGTTCAACCACCCAAACGTCGGAAAGCCTGACGACGGAGCAGCATTCCAAAAAGATCC CTTGGCTCGTCTGGGTCGACTATGGGATCCTCCNTATAGTGAGNAAATACTTTTAATTAA CTATCCATGTTGATCACAAAGAGATTTCTTTATAAAAAAACTTTTGGCACTTATATTTTT TAAACACCACTCCATATATATAGTTGGTAACTTATCCTTAAATTACTATATCTTAAGGAG ATCAACAAGTTGAATCTTTCTCGAAGTGATTTAAAGAAAATAAGAAGATAAGTGAAACTG ATGATGCACTA |
| GenBank Accession | BX284964 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:16124676 - go to primer design |
| BLAST e Value | 4e-69 |
| Hit Clone Code (BAC ID) | MPO12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | BX284964 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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