SimpleSearch - Line and FST details


Line specific information

 
Line ID 015F02
Vector Used pAC106
Line Availability available as T3 set from NASC (N401406)
Segregation Analysis 100:100:97
Confirmed for Hit At5g24270
Parent of DUPLO pair none
Parent of pair(s) 5634, 5647, 5654, 5724, 5742, 7626, 75768, 91535, 91553, 91554, 91556, 91558

Gene hit At5g24270

 
Sequence (A. th genome BLAST matches underlined) 
>14-K019208-022-015-F02-8409
CAAATATTTTTTCATATATGCTAACCCTCTACCAAGAGTATATTCATAGAAGAATGCCAT
AGAATGACTAGAAAACAATTTTTGGAGCTATAACCACCCCCCTATACTATAGAATCCTCC
CTATAGTGAGANNNNNNNNNNNCNNNNNNTNCCNNNNNTTTTCCNTNCTCAATTNCTCCA
TTCCCCTTCNCTTTTAAAACATCNCATATCTNCATATTATAAAACATAACTTTCTTTAAA
TTTACATATNTTTTCAATAATCCCACTTTTTCTATCTAACCACCCTATTTAC
GenBank Accession CR769878 [GenBank]
Graphic View Graphic view of gene At5g24270
Predicted Position of Insertion Chr5:8239428 - go to primer design
BLAST e Value 2e-15
Hit Clone Code (BAC ID) MOP9
Hit Gene Code At5g24270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-binding EF-hand family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR769878 [GenBank]

Gene hit At1g58037

 
Sequence (A. th genome BLAST matches underlined) 
>14-K019122-022-015-F02-8409
TACTCCGAATCTTTACCACATGCTCCACGAATCTTACACTCTGCCGAGGTACTAATATTA
TAGGATGCGGTTGAATGTCTTGATGAAAATGAGCTCGGAAATGTGAACCATCCGCGTAAC
TATGGGATCTCCNCTATAGCGAGACTTCACGAATCCGAACTATGGGATCCTCCCTATAGT
GAGAGAGAATGGTGGTACACGAAGTCATCCCACCTAGATGCAGATTTGTTTACTATGGAA
TCCTCCCTATATTGAGATATGTTTTCAATAATGTCGCTTGT
GenBank Accession FR800418 [GenBank]
Graphic View Graphic view of gene At1g58037
Predicted Position of Insertion Chr1:21473308 - go to primer design
BLAST e Value 3e-11
Hit Clone Code (BAC ID) T15M6
Hit Gene Code At1g58037 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown
Other FSTs Supporting this Hit FR800417 [GenBank]


Last Updated on 10.06.2021 13:37