SimpleSearch - Line and FST details


Line specific information

 
Line ID 015H08
Vector Used pAC106
Line Availability available as T3 set from NASC (N401436)
Segregation Analysis 50:49:40
Confirmed for Hit At5g49220
Parent of DUPLO pair 12815
Parent of pair(s) none

Gene hit At5g49220

 
Sequence (A. th genome BLAST matches underlined) 
>10-K017012-022-015-H08T-8409
GAAATTTCGCAGTCGCCACGCCATATATCCACGGATACATCATGCCTATGGGATTCTCCC
CTATAGTGAGACTGTGAGAAGACGCATCGTTCGCGATGGACTCTATCTTATCTCTATGGT
GACATTTGAATGACCCATCTTCCTTTTCCACTATCTTCTCTATAGAGTGACAGATAACTG
GGCAATGTACTCCTACGAGGCTTCCGGATATTACCCTTTGTTGATAAGGTCTATTGCCCT
TTGATCTTCTGATACTGTATCGATGATATTTGTGGAGTAGACAAGCGCGTCTTGCTCCAC
CATGTTGACTATGATTTTCTTCTTAACATTGAGTCTGAATAGACTCTGTATGAACTGATC
GCCAAACTTTACGGCGAGTTCTGTTAGGCCCTCTAATTGGAATCTATGACTCATTGGGCA
TTCGAGCTCGCGACTCGGGGATCCCCCATGAACATCTCCTTTATACATAGTCAGCATGCC
ATTATGCTTGCTACAAGCCTCTGCTACATACATTGAGAATAATGGATGATTTCTTTGAAC
ATTGATTACCATATAA
GenBank Accession FR800439 [GenBank]
Graphic View Graphic view of gene At5g49220
Predicted Position of Insertion Chr5:19958326 - go to primer design
BLAST e Value 5e-28
Hit Clone Code (BAC ID) K21P3
Hit Gene Code At5g49220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein (DUF789)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR800438 [GenBank] FR800440 [GenBank] FR800439 [GenBank]


Last Updated on 10.06.2021 13:37