SimpleSearch - Line and FST details


Line specific information

 
Line ID 018A05
Vector Used pAC106
Line Availability available as T3 set from NASC (N401637)
Segregation Analysis 50:47:31
Confirmed for Hit At3g61760
Parent of DUPLO pair none
Parent of pair(s) 89713, 89714, 89715, 89716

Gene hit At3g61760

 
Sequence (A. th genome BLAST matches underlined) 
>33-K026162-022-018-A05-8409
ATCCTCCCTATAGTGAGTCAGGATTACTCACGACGATATGGATATCCTCCCTATGGGAAC
CCCCCATATATCGCCCCTTAGTCTATGTCCCCTGAAGCGATCCTCCCTATAACACTCTTC
ATACCACTCATATCACTCGCGAAATCTATCCCTAATGTCGCCGTATTCTTCCTTTTTTAC
CCTTAGGGACATCCGCCTTTCTGAATATCCTTTGACCTTCTTTTTTGTGAGACATAAGCG
ACTAGGACATGGTAAATATGGTTTAATTTCTATGGAGCATTGTATATATGATTGATTAGC
ATCATCAATGCTTAGATGATGATAGTATTTCGAATTGATTGATTCTTGTTGTTTAATGTT
TGCTTCGCTGCACTTTATGCTATCAGGAGACAGGACTTTTGGAGTTTTAACAAAAATTGA
TCTCATGGACCAAGGCACTAATGCTGTTGATGTAAGTTTACATTCAGATGATAGTAATAC
ATTCTACATATCATTAGTCAAGATTATCGTCTAATCTGCAAGCAATC
GenBank Accession CR395219 [GenBank]
Graphic View Graphic view of gene At3g61760
Predicted Position of Insertion Chr3:22862800 - go to primer design
BLAST e Value 3e-173
Hit Clone Code (BAC ID) F15G16
Hit Gene Code At3g61760 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DYNAMIN-like 1B
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g23780

 
Sequence (A. th genome BLAST matches underlined) 
>33-K013476-022-018-A05-8409
TTTTGATCCATGTAGACTTTCCCGGACATTGAAGCATTTACAATTGAATATATCCTGTAG
ATCCCTAAAAAGTAGAGATTTGGACGAAACAAAAGAGGAAACCAGACATCTTGGGAAAAA
ACAGAGTCTTACTGTTGTTGGGAAAGAAAGTTCCAGGCTATATCTGACTTTTGGTTTTTC
TCGTTTTTTTTCCATATATTTTCTTTGGAAGTTTTGATTAATTATTGGGCCGATTATATT
AATTTCTAAACTGATATTGGGCCTGATTAGCTACAACAACACATTTTGGTAGATAAAATG
ATGCCAAAAGCTCGTTTTAAACGTAAGCTATGGGATCCTC
GenBank Accession AL752882 [GenBank]
Graphic View Graphic view of gene At2g23780
Predicted Position of Insertion Chr2:10124534 - go to primer design
BLAST e Value 2e-135
Hit Clone Code (BAC ID) F27L4
Hit Gene Code At2g23780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37