SimpleSearch - Line and FST details


Line specific information

 
Line ID 018F08
Vector Used pAC106
Line Availability available as T3 set from NASC (N401700)
Segregation Analysis 50:34:34
Confirmed for Hit At1g28570
Parent of DUPLO pair none
Parent of pair(s) 5324, 10256, 10278, 10309, 10311, 10335, 10355, 84731, 84732, 84733

Gene hit At1g28570

 
Sequence (A. th genome BLAST matches underlined) 
>62-K013490-022-018-F08-8409
CTGATCCATGGTAGATTTCCCGGACATGAAGCACTTCCACATACTACAGAGCTAATTGCG
TGGTAGGTGTTTAGATTAACAACAAACTACATAATTTCCACGTGCTTATACATTAAAATC
AATTATTCATATGTGTTTTTGTAAGAAGGGTGAAACCAAAATAGAGAAAGCCTATGGGAT
CCTCCTATAGGTGAGANNNCGNCNNNGGAGATATCCCATCAATTCACTTGCTTTCAAAAC
GTGGATGGAACGTCTTCTTTTTCCACGATGCTCCTCGTGGGTGGGAGGTCCACCTATGGG
A
GenBank Accession AL752961 [GenBank]
Graphic View Graphic view of gene At1g28570
Predicted Position of Insertion Chr1:10043532 - go to primer design
BLAST e Value 6e-71
Hit Clone Code (BAC ID) F1K23
Hit Gene Code At1g28570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SGNH hydrolase-type esterase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL936097 [GenBank] AL752961 [GenBank]

Gene hit At3g57340

 
Sequence (A. th genome BLAST matches underlined) 
>23-K017011-022-018-F08T-8409
TGATCTGTAATTTCCCGGACATGAAGCCATTTCACACATACTACAGAGCTTGTTTGCGTG
CGTAATGTCGTTTATATTAGCTACATACTACTTAATTTCCACGTGCTTATACACTTATAC
ATCAATTATTACTATGTAGTTTTTGTACTAATGGTCGAAACCACATATAGATATAAGTCT
ATGGATGCTATGGGATCTCCGCCTATACTCGTACGTCCTGATTCTTCTCTCAATCTCTTG
TTTTCTATGGGATCTCCCCTATAGTGAG
GenBank Accession AL936096 [GenBank]
Graphic View Graphic view of gene At3g57340
Predicted Position of Insertion Chr3:21218953 - go to primer design
BLAST e Value 7e-09
Hit Clone Code (BAC ID) F28O9
Hit Gene Code At3g57340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DnaJ heat shock amino-terminal domain protein (DUF1977)
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37