SimpleSearch - Line and FST details


Line specific information

 
Line ID 019C03
Vector Used pAC106
Line Availability available as T3 set from NASC (N401755)
Segregation Analysis 50:49:48
Confirmed for Hit At1g22870
Parent of DUPLO pair 555
Parent of pair(s) none

Gene hit F13M11

 
Sequence (A. th genome BLAST matches underlined) 
>19-K013491-022-019-C03-8409
ACCTATGGGATCCTCCCTATAGTGAGAAAAACTCATGTTTGGAATGAAAATTGGGAAAGG
GTTTTGGTTTTGTTTTCGGATTGAAATATAATGATCCTAACTTTTTTGAAATATAATTTT
AAGACACCTTACCACATTAATGGCCTATGATCGAGGAAGGCCCCCTTGGAGTTAAAGGAT
CATGATTCAAAATCTTCACCTTCGATATTAACCATGGTGAGCCAAAAAAAAGGTTTTAAA
TTAAAGGACCGGCTATTTCACATATTTCGGATAAAAGGGTTGGGCCCTTGGGGGTTTCAA
AAAACAGGTCCCACATAAAGCAAACTTGGCCCACCCCTCAAAAACCTGGTTTAAGGTTGG
TTACAAAATTATTACGCACAGCCCTGATAGGTCGGGGCAAAGCCAAACCCCGCCGAAAAG
GGCCCTATAACTTTGCTATTATAACAAGAACCCCCCCACACCTTCCCTTTACCCCTCTTG
GGGCCTCCCGAACCGGCATATATCCCTCCCTTCAAGAATAACTCCACTCCTCCTGGAGAA
ATGGGAAAAGCGTTCTTTAGGAAATGTGCACCTTTCAATCGCCACATTCCTAAATTCTCT
TCACAAAAAACTCTTTTTGTCCCACCGCACCCGGTCTTTTTAAAAAGGTTCTCACCCCCC
CCTTTGGACCCCCGACCCCAAATCTTTCCCCAGCCGGCGGGAAACAATCGCCCCACCCCT
AGGGGTTCCGCCCCACCAAAATAACACACAACCTTCCTACTCTCGGGGTGTTATATCCCG
ACAAAGAACAATCCTTGCGGTTGATGTTT
GenBank Accession FR800585 [GenBank]
Graphic View Graphic view of sequence FR800585 of line 019C03
Predicted Position of Insertion Chr5:7253735 - go to primer design
BLAST e Value 2e-49
Hit Clone Code (BAC ID) F13M11
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit FR800585 [GenBank]

Gene hit At1g22870

 
Sequence (A. th genome BLAST matches underlined) 
>19-K025794-022-019-C03-8409
AAGCAAGGAATCCGCCCGAGTGTTATCGCCCTATGGCATCCTCCTCATAGTGAGGAACTT
AGGAATTTGGTTATGCAACCAGTGATTCTTCCCATGGTTCTAACTATAGCAGAGTCTCAC
GTGCTTTTTCTAATCTTAAGTATGGGATCCTCCCTATAGATGAGGCAAGTGAAAGTTCNN
GTTCAAGATATAAGTGTTACGGGCAAGGAGGAAAAGTTTGTCTCAAGAAATAATCGCCCC
ACATGAACCTCAATATTCCTACCTGTGAAATCTAAAGCTGTTGGTCAATGTGAATCGTTC
ATTGATATCTTCCGTTG
GenBank Accession CR395346 [GenBank]
Graphic View Graphic view of gene At1g22870
Predicted Position of Insertion Chr1:8091249 - go to primer design
BLAST e Value 4e-40
Hit Clone Code (BAC ID) F19G10
Hit Gene Code At1g22870 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinase family with ARM repeat domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR395346 [GenBank]


Last Updated on 10.06.2021 13:37