SimpleSearch - Line and FST details
Line specific information
| Line ID | 022B01 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N402029) |
| Segregation Analysis | 50:35:29 |
| Confirmed for Hit | At3g56170 |
| Parent of DUPLO pair | 2562 |
| Parent of pair(s) | none |
Gene hit At3g56170
| Sequence (A. th genome BLAST matches underlined) | >21-K018342-022-022-B01t-8409 GATCATGAAATTTCCCGGACTCGAAGCCATTTACATTGAATATATCCTGCCACAGATTTT GTATCCACCTTATTTCATTTAGAAAATTTCTTGATCAGCAGCAACAACATTACCATCATA TCCCAAACCTTTTAAAGATTCGTAAGTTTTCTAACCGGAAGCGTGTTAAGCTCAAACCGA ACTCCTTTAGGTAAAGACACAGGAGCTTCCGTAGGGACCTCAACGAGATTGTGAGGTGAA GGTAGTCCATAGAAAGACAAAAGTCCCTGTCAATGCCATTAACAAGTCAACTATATCAAT AATGCATCCTCCAAAACTCCTTGACATTTTTGCAACTTGAAAGAACCATCATGATTAGTT AATACCTCAACATCTGCTTTTTGATGGTTCTTTAGAGCCGCGATAACAAGCCTGGAGGCT TCCTCAGGAGTTTTAGGCCGAGGCTTAGCTTGCTTCCATGCCTCAAGTATTTTTCTATAC CTTCAAATTAAAACATGTTTTGGAAGAAAAAGACATTAAAATATGAACATTTTCAAATCT TTATAGACAACATTAGCATGATCTGTACCAGTTTGCTTGAGCCTTTTGGGAAGACACAAC GTAACTCCCAAGCTTCTCAGGAACCTATG |
| GenBank Accession | BX285087 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:20843482 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F18O21 |
| Hit Gene Code | At3g56170 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ca-2 dependent nuclease |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL762236 [GenBank] |
Gene hit At4g00220
| Sequence (A. th genome BLAST matches underlined) | >02-K013726-022-022-B01-8409 ACTTTGATCCATGTAGATCTTCCCTGGACATGAAGCCTTTACAATTGAATATATCCTGCC GCCGCTGCCGCTTATCACTCTTTCATATTTGTTGGCATTATTATCCATTTCAATTTCGTT ATAAAAAAAACGGGTGGTAAGTTTGCAAACTGAGCTTTCATATCTACAAGCACACTTAGC AACGCTATGGGATCCTCCCTGTAGTGAGATACNACCTGGTACTGATGGCGGNTTCCCATC TAACCGAATCCATGAACCGATACCGGGAAGGGAAGGGAGACAAGCCCGGCCGCGTGTTCC GTCCACACGTTGCGGACGTACTCAAGTTCTGCCGGCGAGCCGATGGCGGAAAGCAAAAAG ACGACCTGGTAGAAACCTGCATTCGGTTAAACACCACGCACGTTGCCATGCAGCGNACGA AGAAGGCCAAGAACGGGCGCCTGGTGACGGTATCCGAGGGTGAAGCCTTTGATAGCCGGC TCAAGATCGTAAAGAGCGAAACCGGGCCGGCCGGAGTACATCGAGATCGAGCTA |
| GenBank Accession | AL762235 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:91647 - go to primer design |
| BLAST e Value | 2e-40 |
| Hit Clone Code (BAC ID) | F6N15 |
| Hit Gene Code | At4g00220 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Lateral organ boundaries (LOB) domain family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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