SimpleSearch - Line and FST details


Line specific information

 
Line ID 022E02
Vector Used pAC106
Line Availability available as T3 set from NASC (N402066)
Segregation Analysis 50:49:45
Confirmed for Hit At1g49730
Parent of DUPLO pair 2660
Parent of pair(s) none

Gene hit At1g49730

 
Sequence (A. th genome BLAST matches underlined) 
>62-K018342-022-022-E02t-8409
TATAGTGAGATTGAATTCTCAAATTGCTTGCTCTTCCTACTATCCCAGCCTATCTCTTCT
TCAACCGCTTTAGCAGAATGCGCTATGCACCGGATCACAGCTTTCACACAACAGCCTCAA
GACTTGCTTAATTGATGGCCTATGGGATCCTCCCTATAGTGAGAAGACCNNAATACCGAC
TGGTCGCCCTTGTGGTCGGCCGGGGGGTTAAAATAAGAAACTTGGGATCATACCCATGTT
CACGCAATTCGACTCCCNCTTTCTTTTTGCGGCTTTCGTCAGATTATTAACATCAGAGAC
TTGTTCTTTCAAGAAAGCATGGTTGGAAGAGAGGGAATCTT
GenBank Accession BX285113 [GenBank]
Graphic View Graphic view of gene At1g49730
Predicted Position of Insertion Chr1:18402712 - go to primer design
BLAST e Value 5e-59
Hit Clone Code (BAC ID) F14J22
Hit Gene Code At1g49730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX285113 [GenBank]

Gene hit At2g36200

 
Sequence (A. th genome BLAST matches underlined) 
>62-K018341-022-022-E02t-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACTATTGGAGATACCTCCCTAGTAGACGA
GTTTACTGAGCACCCGATGTAGATAGCATGTTGGTTCCTACGGAAGATTGATCCGTGATT
GCGCATGACTCCCATGTGACGAACTGTAATATGGCTACCTGCTACTGCGCAGGGCTCCTC
ACTAGTATCAGAAAGGAGCCGCATAACATAGTTAAGGAACTTACCATTGCTGAAGCAGTA
CCTCCATTCGACAATGTTTTGCAGACGAGAAATCAACACCTTCTCTGGCTTCATTCTCAG
CTTGCATGGAAAATGTCTCCCACTTTCTTTTTGCGTCTTTCGTCACATTATTAACAGCAG
AGACATGTTCGCCCCACAAAGTTTTGTTGGAAGACACGGTTTCTTTATAGTTATGGACTC
TTGAATCAACCTGCCTAGCACAACATACCGTTTATGTGACACAGGACTGCCAGACAGACA
CTATTCCTTGAGTGATGATGCAACGAACCAATTCGTGTTGACGACGAATGTGACTTGAAG
CTATGGGACCTCCCCANGGATGGAGAAGAGCGCCGCCCGCTGGCCTGCTGGGCTATGCCC
ACGTCAGCCACGACGACCAGGACTTGACCAACCCACGGGCCAAATGCCAACTCGGGCGGC
TGCACCACCCTGTCTTTCCGAGAAGATCACCGGCCCCCGGTTCCAACGGCCCGGAACTTG
GCCAGGATGCTTGGACCACCTACGCCCTGGCGACCTTGTGACAGTGACCAAGCTA
GenBank Accession BX285112 [GenBank]
Graphic View Graphic view of gene At2g36200
Predicted Position of Insertion Chr2:15180792 - go to primer design
BLAST e Value 2e-101
Hit Clone Code (BAC ID) F9C22
Hit Gene Code At2g36200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit BX285112 [GenBank]


Last Updated on 10.06.2021 13:37