SimpleSearch - Line and FST details
Line specific information
| Line ID | 026G04 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N402476) |
| Segregation Analysis | 100:79:73 |
| Confirmed for Hit | At3g45600 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3572, 8318, 72790 |
Gene hit At3g45600
| Sequence (A. th genome BLAST matches underlined) | >84-K028756-022-026-G04C-3144 TTCATTTTCATTTGGAGAGGAACGGGTACCCGGGGAATCAGAATTGTCGTTTCCCGCCTT CGGTTTAAACTATCAGTGTTTGTAGGAGCTTCCTTCGGTATAAACTTCGCAAGAACTTCC CACTATCCCACTAAAGTGTAGTTGTTCAAGTTCTTGTTTTGTCATAAATCTTGAATCTAG AAATGCTCTGTTTTGTTTATTTTCTTTATGAAAGATTCTTTTGCTATATATATTTTGGTG TTGATTATTATATTTATGAGCCTAATAATCTAATATTGTGGTTGTAATAATTGTTACTTA GAGTGTTCACTGTTTAGTGTCTCTCTTCTTTACCTGCTTATGATAAAAGAGTTATTAATA TTGCGGTTTATGATATGTAATTGTTGTTGTTAATTTGCAGTCCGGTTGTTGCAAGCCACC AACAGATTGCGGTTTTTCATATGTGAATGAGACCGGATGGGACACGAGAGGAGGGATGAT AGGACCGAACCAGGACTGTATGGTGTGGAGCAACGACCAGAGCATGCTCTGTTATCAGTG TAGTTCTTGTAAAGCTGGTGTTCTTGGGAGTTTGAAGAAGAGTTGGAGA |
| GenBank Accession | HG968600 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:16734585 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F9K21 |
| Hit Gene Code | At3g45600 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tetraspanin3 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | HG968600 [GenBank] |
Gene hit T6K12
| Sequence (A. th genome BLAST matches underlined) | >31-K013759-022-026-G04-8409 NAATGGATCCCATGTAGATTTCCCGTACATGAAGCCATTTACATGAGGTCACCATGGTGG CCACAGAAAAGCAAGCAAGAGGACTCTGACTGAGACAGAGTAGTAGACCAGGCGTCGTAA CATAGCACAACCATTCTTCCAGGCTCATTAGACTTGTCCTCTATAAGCAATTGACCTCAT AGATTGACTTGTGCCAGCGACTCCCGAGCGAATGAATTACATGATAAAACCTAATCTTCC TCGATATTTAATTACTAACAGAGGAAATTGGTGGAGATCGGGGGTATGTGCGTCCATGAG AAACGACCTCTGGGAGCCTACCTCTATTGAGAACATGATAAATTCGTTGACCAAACCAAT GTTAACATGTCGCCATTATTCATCCAAAGAAC |
| GenBank Accession | AL762646 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1105238 - go to primer design |
| BLAST e Value | 5e-25 |
| Hit Clone Code (BAC ID) | T6K12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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