SimpleSearch - Line and FST details


Line specific information

 
Line ID 028F05
Vector Used pAC106
Line Availability available as T3 set from NASC (N402657)
Segregation Analysis 40:24:19
Confirmed for Hit At5g39450
Parent of DUPLO pair none
Parent of pair(s) 66947, 96383, 96384

Gene hit MUL8

 
Sequence (A. th genome BLAST matches underlined) 
>38-K013762-022-028-F05-8409
NAATTGGATCCATGTAGCTTTCCCTGGACATGAAGCCTTTAGTAATTGGAATCACATGAA
CCTGGAGGTATGAGTGCACAAATATTCCAAATCAGGTAGACATAATATCAAATCGTGGAA
GCATCTTTGGGATCCTCCCTATAAGCGATGAAAAACCGCGATGAAATGTTCAAAATAGTG
TATTTTTGTGGGAAACGAGAAAAGCCTAAGACTATATCTTCTTTGCATGCCCTTTCACAT
ACACTAAAATATGGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL762847 [GenBank]
Graphic View Graphic view of sequence AL762847 of line 028F05
Predicted Position of Insertion Chr5:15780787 - go to primer design
BLAST e Value 5e-53
Hit Clone Code (BAC ID) MUL8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g39450

 
Sequence (A. th genome BLAST matches underlined) 
>38-K013763-022-028-F05-8409
TTGATCCATGGTAGATTTCCCGCACATGAAGCACTTTATAATTGGAATCACATGAACCTG
GAGGATGAGTGCACAAATATTCCAAATCAGGTAGACATAAACAAATCGTGGAAGCACCTA
TGGGATCCTCCCTATAGTGAG
GenBank Accession AL762848 [GenBank]
Graphic View Graphic view of gene At5g39450
Predicted Position of Insertion Chr5:15786967 - go to primer design
BLAST e Value 4e-35
Hit Clone Code (BAC ID) MUL8
Hit Gene Code At5g39450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37