SimpleSearch - Line and FST details


Line specific information

 
Line ID 029B02
Vector Used pAC106
Line Availability available as T3 set from NASC (N402702)
Segregation Analysis 50:36:33
Confirmed for Hit At2g46500
Parent of DUPLO pair 2774
Parent of pair(s) none

Gene hit At2g46500

 
Sequence (A. th genome BLAST matches underlined) 
>10-K028792-022-029-B02-8409
GAAGCCTTTACAATTGAATATATCCTGATAGTTTAGACCGAAGGCGGGAAACGACAATCT
GATCCCCGGGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACTGTCTTTTAAACAG
ATCCCTTGCGCACATCGCAGCTCTGCTCTCGGACTCGAGCACTCGCTTCGGTATCACCGA
TCCAGGAAGTGTAAGGTAAGTCATGATGGTGTCGTCAGGATAANAATCCACACCGGATTT
GGCCCGAACCAGAGGCATAATCGGTGGCTCGCTACGAACCGGACTTAACGCAACNCCAGC
TGATGACATCTTCTTTCACTTGGAGAAATCTAAGAACTTTCTTACGGAAAAAAACGGGAT
TCGATGTTCTTCACAA
GenBank Accession CR934019 [GenBank]
Graphic View Graphic view of gene At2g46500
Predicted Position of Insertion Chr2:19088262 - go to primer design
BLAST e Value 4e-77
Hit Clone Code (BAC ID) F11C10
Hit Gene Code At2g46500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phosphoinositide 4-kinase gamma 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g60787

 
Sequence (A. th genome BLAST matches underlined) 
>10-011559-strizhov-B2-oriL
CTTGATCCATGTAGCATTTCCCGGACATTGAAGCATTTACAATTGAATATATCCTGATGA
TGATAGCCCATTATAGAATAGATTAAACTATCCTTTGCTTATACTGTGTTTATTCTTGAT
GGAGATGTTCGTAAAAAAATAAAATGCACGAGGACCTGCCTGTTCGAATACATCGTTTCC
CTTAAGTCCTGGGATCTAATCCCTATATGACAGCTTGCACCACTCTGTGATGAGGAGGGT
CTCAGTGGAAACCTATTGACCTGTAGGGTGGAGGAAACATTTCTGGTCCTCACGGGAGAG
AACGGATCAGATACAAACTCGTTCATCCCATTCATTCTCACAAACTTGAAATGGACCTGC
TGAGGGATTTTAAGTGCATTGCCTGCAAACTGGATATTAAATCATGTGGCCCTTTTGTGC
TTCATTTGGTGAAGCCGCCTTGCATAATAAGTGCATCAAAGATGTTGAAGGAC
GenBank Accession FR800735 [GenBank]
Graphic View Graphic view of gene At1g60787
Predicted Position of Insertion Chr1:22379463 - go to primer design
BLAST e Value 3e-60
Hit Clone Code (BAC ID) F8A5
Hit Gene Code At1g60787 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cysteine/histidine-rich C1 domain protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37