SimpleSearch - Line and FST details


Line specific information

 
Line ID 029E10
Vector Used pAC106
Line Availability available as T3 set from NASC (N402746)
Segregation Analysis 50:15:10
Confirmed for Hit At1g09580
Parent of DUPLO pair none
Parent of pair(s) 75707, 75714, 75720, 75723, 75724, 75725, 75726

Gene hit At1g09580

 
Sequence (A. th genome BLAST matches underlined) 
>77-011559-strizhov-E10-oriL
NTGATCCATGTAGCATTTCCCGGACCATGAAGCATATTGAATATCGTAATTGCGTTACGT
TTTCATATTGTGCACATTGGTGCCATATGGGGATGTCACCTGCACCATACTGATTCTCAT
AACTCAGAGCCAAGATTACTTAGGAACAGAGGTTGCCATTGCAGAAAAGCATTGTATTCC
TTTTTTCAAGTCGACTTCAAAGACTGCTCTCAATCCAAAGGACACTATCTTAAACAATCC
ATCAAACTATCTGGAACTATGGGATCCTCCCTATAGGGAGGCGCATCACTCANGGGACCA
CTGTCGGCAGAGGCATCTTCAACGATGGCCTTTCCTTTATCGCAATGATGGCATTTGTAG
GAGCCACCTTCCTTTTCCACTATCTTCACAATAAAGTGACAGATAGCTGGGCAATGGAAT
CCGAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCAATTGCCCTTTGGTCTTCT
GAGACTGTATCTTTGATATTTTTGGAGAAGACAAGCGTGTCGTGCTCCACCATGTTGACG
AAAATTTTCTTCTTGTCATTGAGTCGTAAGAGACTCTGTATGAACTGTTCCCCAGTCTTT
AAGGGGAGTTCTGGTAAGTCCTCTATTTGAAATTTGGACTCCATGGAAATTTGGGGATCA
ATT
GenBank Accession AL762902 [GenBank]
Graphic View Graphic view of gene At1g09580
Predicted Position of Insertion Chr1:3105534 - go to primer design
BLAST e Value 2e-77
Hit Clone Code (BAC ID) F14J9
Hit Gene Code At1g09580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation emp24/gp25L/p24 family/GOLD family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37