SimpleSearch - Line and FST details


Line specific information

 
Line ID 030H08
Vector Used pAC106
Line Availability available as T3 set from NASC (N402876)
Segregation Analysis 43:31:25
Confirmed for Hit At1g71530
Parent of DUPLO pair none
Parent of pair(s) 82929, 82934, 82940, 82943

Gene hit At1g71530

 
Sequence (A. th genome BLAST matches underlined) 
>64-K025962-022-030-H08-8409
GNAGCCATTTACAGTTGAATATATCCTCGCAGGCTCCATGCTGCATATTCCTGCGAATGT
AATTCTCCTGAACCGGCACGCTATTACATATTTCTGTTTTTCCTATGCACATTGAATAGA
TTGGAGTAATTCAAGTTTTGATGAAACCATTCCTACCTTCGATGTTTCTAGATCACGTGC
CTATATGAATGATCTTGTTGCGTGCTTTTTAATCTTTGCCACAGAATAGGATTTCTTCAC
AATGATTTTAAACGTTCAAATCTCTTAATCACTGATGAAGGTGTCTTGAAGATTGCTGAT
TTCTTATTGGCGAGTTTTTAATCATCTGAAGAATATGTGCAGCTGACCAGTCGTGTTGTG
ACCTTATGGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR395619 [GenBank]
Graphic View Graphic view of gene At1g71530
Predicted Position of Insertion Chr1:26940546 - go to primer design
BLAST e Value 3e-28
Hit Clone Code (BAC ID) F26A9
Hit Gene Code At1g71530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T16B24

 
Sequence (A. th genome BLAST matches underlined) 
>64-K025983-022-030-H08-8409
TTAAAATTATAGTAATCTACAGAAATTGACAAACGTACTTATAACTGAACTTTGGTTCTC
ACATGTGCTCTTCTAATCATTCATTAAGACTCTTACAAATCCTTTTCAAATTTCACATTG
TCACTGTTTAAGAAAATCTTTAAGAGATCAATACTCATAAAGTTCAAATTTGCAATAAAT
TAATAGACACACAATAAAGTGACTAACGAATAAATTTTAACATAACGGCAACGCGATAAC
TGCTACAACTTATTTATAGCGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR395620 [GenBank]
Graphic View Graphic view of sequence CR395620 of line 030H08
Predicted Position of Insertion Chr2:16341515 - go to primer design
BLAST e Value 8e-112
Hit Clone Code (BAC ID) T16B24
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37