SimpleSearch - Line and FST details
Line specific information
| Line ID | 031E09 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N402937) |
| Segregation Analysis | 50:33:33 |
| Confirmed for Hit | At4g34200 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3121, 3353 |
Gene hit At2g31230
| Sequence (A. th genome BLAST matches underlined) | >69-K113048-0022-031-E09-8409 CCTGTCCCGAGCCACACAAATTTGTTTATTGCTTTCGCCTATAAATACGACGGATCGTAA TTTGTCGTTTTATCAAAATGTACTTTCATTTTATAATAACGCTGCAGACATCTACTTTTT TGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCA TTGCTGATCCATGTAGATTTCCCGGACATGAAGCCATTTACAATTGTTGAAGTGAGGGTG GGTTTCCTAACCTGCCCGGCCACTATGAGTATATTTCGATCTCATTTGTGGCAAATGTTT TTAGAGTGTGTATATTAAGAAACACCATCCTCCCCGGGCATCAAATACCATCTTCCACGT CTTCCGATACAATAAAAAAATGACAATCGTTGTTATTTTGAATTTGTTCGTTTAAGTCTG GTCTTGTCAGATTTCTTGGATGACATACCACAAAGGCCCAACCAAAGGATTCAGTTTTCA TAAGTACATAAACCATATATATTAAATCCGATGACTAAAGAGTAGCAGTCACATATCTAA GGTTAGCAAGAAATTGTGGAATAAGAGGATAAACTTTTGGTTAGATGTATGTAGGCAAGG ATGTTATGTACTGATCCATTTTACAAATTATAGAAGATACAAGGTTAAGTCAAAACTATT AGGTCGCTTGCATGTCATGTGTTCTCAAAACTAACCTG |
| GenBank Accession | FR800892 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:13307770 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F16D14 |
| Hit Gene Code | At2g31230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ethylene-responsive element binding factor 15 |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
Gene hit At4g34200
| Sequence (A. th genome BLAST matches underlined) | >69-K113047-0022-031-E09-8409 AATTTGTTTATTGCTTTCGCCTATTAATACGACGGATCGTAATTTGTCGTTTTATCAAAA TGTACTTTCATTTTATAATAACGCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTG GTAATTACTCTTTCTTTTTCTCCACATCGACCATCATACTCATTGCTGATCCATGTAGAT TTCCCGGACGTGAAGTCATTTACAATTGTTGAAGTGAGGGTGGGTTTTCTACCCTGCCCA GACCACTAGCGTGTGCNCGGTCTGCTGGGGCATAGGGATCATGAGCAATGACACGCATAC CAAGACCCTTAGCACGACGAGCAACTTCCGTCCCAACTTTCCCGAATCCCAACACTGCAA GGGTCTTTCCCACAAGTGAAACACCTACATACTTGTTCCTCTTCCACTCTCCTGCATTAC AATGGTATTATTAAAACCAAGATCCACAAGTCAGCTAACCTGCCCGGCCGCTAAAAANNT NATNANTNNNCNCCCNTGGTGTGTGCTCGGTCTGCTGGGGCGAAGGCCTCCTCNTCNTTG ACACGCAAACCTACATTTTTATCACGACAAAAAATTTCCGTCCCAACTTTTCTGAATCAA AACACTGCAAGGGTCTTTCCCACAGTGAAACACCTACNTACTTGTTCCTCTTCC |
| GenBank Accession | FR800891 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16375313 - go to primer design |
| BLAST e Value | 1e-112 |
| Hit Clone Code (BAC ID) | F28A23 |
| Hit Gene Code | At4g34200 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | D-3-phosphoglycerate dehydrogenase |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR800890 [GenBank] FR800891 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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