SimpleSearch - Line and FST details


Line specific information

 
Line ID 032A01
Vector Used pAC106
Line Availability available as T3 set from NASC (N402977)
Segregation Analysis 50:36:30
Confirmed for Hit At5g43140
Parent of DUPLO pair none
Parent of pair(s) 3110, 6910

Gene hit F8B4

 
Sequence (A. th genome BLAST matches underlined) 
>49-K014864-022-032-A01-8409
TTGATCATGTAGATTTCCCGGAATGAAGCCTTTACATTGAATATGTCTTTGGGCTCAAGT
CTACAAACGGTTGATAATGTATATCCTA
GenBank Accession FR800961 [GenBank]
Graphic View Graphic view of sequence FR800961 of line 032A01
Predicted Position of Insertion Chr4:15635762 - go to primer design
BLAST e Value 1e-10
Hit Clone Code (BAC ID) F8B4
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g43140

 
Sequence (A. th genome BLAST matches underlined) 
>01-K014863-022-032-A01-8409
TTTTGATCCATGTAGATTTCCCGGACATGAAGCGCTTTACAATTGAATTATCCTGGAAAT
CTACATGCATGCATGTCGACTCTATGGGATCCTCCCTATAGTGAGATGNACAGCTGTCAG
CTTTCGCCTGGTTTGCCATATATGTCAAATGGATAGTCCATATATATGCGCACGAGCTAT
TGATGAGTGGCTGCGACCANAAGATTAGCAAGTTGAAGTTGGGAAGTGTGTTGAAACATG
CCAAACGATACGGAAAGTAGTAAGATAGATATTTGGGTTACCTGTGGATGAACTGGCGCA
TACTTGAATGTAACAAAATCACAGACCGGCCAATACATAAGTGCATTTTTCAATGTTGGC
AGAAGATCTCTCTTCAATCTCGCCACAATTTCCTCAGAATTTTCGCCTTAAAAAGGACCA
ACGACGTGCCAGAACCAATCTCATAATGAGCACCATAGATTTACAGGCAGAGAAACCGTA
AAAAGCTAAATCCGTTCAATCCATACAGGTTTGATTATGTTATGTACCTTGGAAAACAGC
ATTGTAGGAATAGAAAACTGTGTTGCTTACAGGTGCCGAGAGAACCTGCCCCCATCTATA
TTTTCTTATAAGGTGGCCACACGTCGCGCCTTTGGCCATTTCTTGGAAAGATAACTGAAC
CACAGAAGCTGA
GenBank Accession AL763053 [GenBank]
Graphic View Graphic view of gene At5g43140
Predicted Position of Insertion Chr5:17323223 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MMG4
Hit Gene Code At5g43140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37