SimpleSearch - Line and FST details


Line specific information

 
Line ID 032C02
Vector Used pAC106
Line Availability available as T3 set from NASC (N403002)
Segregation Analysis 50:24:15
Confirmed for Hit At3g12670
Parent of DUPLO pair none
Parent of pair(s) 1099, 3989, 4014, 4091

Gene hit At4g34800

 
Sequence (A. th genome BLAST matches underlined) 
>11-K014863-022-032-C02-8409
TGATCCATGTAGATTTCCCGGACATGAANGCCTTTACAATTGAAATATCATGAGAGTACC
CTGATAGCTTCCCGATCCTAGCTATGGAATCCTCCCTATAGTGAGAGGGNCCCTATCTGA
TTATATTCATTCTTAGGTCATACAGAAATGAGAATGAGCTTGATGCTTTTTCTATGGGAT
CCTCCCTATAGTGAGGGANAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAA
TGTAAATGTCCGCACCGTTATTATA
GenBank Accession AL763069 [GenBank]
Graphic View Graphic view of gene At4g34800
Predicted Position of Insertion Chr4:16596510 - go to primer design
BLAST e Value 2e-21
Hit Clone Code (BAC ID) F11I11
Hit Gene Code At4g34800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SAUR-like auxin-responsive protein family
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At3g12670

 
Sequence (A. th genome BLAST matches underlined) 
>59-K014864-022-032-C02-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCACTGACAG
TGCCCTGACCGTTATTCCGAGGCTATGGTATTCTCCGAATACAGAGTTGATTTAGCGTAC
CCTTGCAGACGCCAGATGTCCATAAGGCTGCATGGGATCTTTTGAAGGACNGTGAATTTT
AATGGAGCCTGGCACACCAATTTGGTAAATATGTTTGACTCAACACTTCGGTTGTTGCAG
GGTGCTGATGGTATCCTATGGGATCCTCCCTTNAAGTGAG
GenBank Accession AL763070 [GenBank]
Graphic View Graphic view of gene At3g12670
Predicted Position of Insertion Chr3:4021683 - go to primer design
BLAST e Value 1e-68
Hit Clone Code (BAC ID) T2E22
Hit Gene Code At3g12670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CTP synthase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37