SimpleSearch - Line and FST details
Line specific information
| Line ID | 034H01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N403253) |
| Segregation Analysis | 100:88:67 |
| Confirmed for Hit | At4g12440 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4108, 4114, 9943 |
| Note |
Gene hit At4g12440
| Sequence (A. th genome BLAST matches underlined) | >08-K015037-022-034-H01-8409 TTGATCCATGTAGATTTCCCTGCACTGAAGCCATTACACTTGAAGCCAAGCTATGGAATC CTCCCTATAGTGAGAGCTNTAATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCC GGGGATCACATTGTCGTTTCCCGCCTTCGGTTTAACAAACGAGGCTCTCTTTTTTTGTCC TTGTAACATACGCAAGAGACGGGTTCAAGAGCACATGCCAACTTACGATGATACAAAGGA CCAAGTTTACATGGATTTATACTTGAAATATATGCATCTCTTTTATCAAAAATAAAATAA CATGAAATTTCTTACTATCTCAGCCCCTTGACACTCCCTTTTTGCGTGTATGCGGTACAA TTTTTTATCTGATCGA |
| GenBank Accession | BX649663 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:7378253 - go to primer design |
| BLAST e Value | 2e-83 |
| Hit Clone Code (BAC ID) | T1P17 |
| Hit Gene Code | At4g12440 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | adenine phosphoribosyl transferase 4 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX649663 [GenBank] |
Gene hit At3g01190
| Sequence (A. th genome BLAST matches underlined) | >08-K015007-022-034-H01-8409 CGTCGCATCGGAGGGCCTGCTTTTCTTCCTGAGACTTAGCGGCGTACTCCGAGTCCAAAC TTGGGTCGGTGTCTCCTTTTCCGGTGAAGTTGAAAAGCCGGTTTGTCAATAAAGGACAAT GTTTTAATCAATTGTGAGACCACCCTAGGGGACCCCCCCTATAGGGAGGGTTAAAAAAGA AAAAGGAATTGCGAATTTGGTAGAAAGAAAAAAAGCGGAAGGACCGAAACCGGAAAAAAC AACAAACGACGGAAGGAAGAGAGGGAAGAGAAAAAAGAAACACGACGATACCCATAAAGG AAAGTAAATGAGAAAAGAGATGAT |
| GenBank Accession | AL763224 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:67465 - go to primer design |
| BLAST e Value | 2e-43 |
| Hit Clone Code (BAC ID) | T4P13 |
| Hit Gene Code | At3g01190 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Peroxidase superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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