SimpleSearch - Line and FST details


Line specific information

 
Line ID 035F02
Vector Used pAC161
Line Availability available as T3 set from NASC (N403326)
Segregation Analysis 50:42:41
Confirmed for Hit At1g11810
Parent of DUPLO pair 11843
Parent of pair(s) none

Gene hit At1g11810

 
Sequence (A. th genome BLAST matches underlined) 
>14-K015008-022-035-F02-8409
AGGTGAAGTATCCATCTCTGTGAAAGATGAAAGCATTTCCGTGGTTGAGATCCAACTCTG
TCTCTTGACCGAAAACTACAACGACTTGCTTCTCCTCGTCAACGATGAATCTCCCAGCTG
TAAATACATCCGGAAAACCATCCAGCGTCGCCAAGTCCACTTGCAAAAACTCTCTCCACG
ACACCTTGTTGGGCTCGATCTCAGTCGAAATCCAAATACCTAAAGTGTCACGTTGATATA
ACACAGCAAGATGATCATCTCTAACACAAGATATAACCATAATGCCTTCTCCTTCATCAC
CCAAAGACTCAAACGGCAGAGACAGAAGCTTTCCAAAACTCTCTCTTGTGAAGTCAAAAC
AGAGTAAATTATATTCCCAAACTCCTTCTTCAATTACCTTTATAACCCGAAAGTAAGCAT
TTCCCTTCAAAGACACGCTTCCTATG
GenBank Accession AL763296 [GenBank]
Graphic View Graphic view of gene At1g11810
Predicted Position of Insertion Chr1:3990796 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F25C20
Hit Gene Code At1g11810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box associated ubiquitination effector family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g10900

 
Sequence (A. th genome BLAST matches underlined) 
>14-K015038-022-035-F02-8409
NTGATCCATGTAGATATCCCGAACTTGAAGCACTTTACAATGTGAAGTATATCCTGCTTT
TCTTATCTCTATAGAATCCTACTTATAGTGAGAAAGCAACTTAGTAGTCAAATATCAGCA
TTACGAAGAAATAGCTATTGCGAAGCAGATTGATTAAGAAAACAAAAAAGAAGTAATCTT
TAATTTGTGATTTGAGTAAGTCATACACAGAAGTAAGAATCTATGGGATCCTCCC
GenBank Accession AL763297 [GenBank]
Graphic View Graphic view of gene At1g10900
Predicted Position of Insertion Chr1:3636767 - go to primer design
BLAST e Value 4e-69
Hit Clone Code (BAC ID) T19D16
Hit Gene Code At1g10900 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphatidylinositol-4-phosphate 5-kinase family protein
Insertion Classification TS2TE (5')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37