SimpleSearch - Line and FST details


Line specific information

 
Line ID 036A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N403365)
Segregation Analysis 50:49:36
Confirmed for Hit At1g60470
Parent of DUPLO pair none
Parent of pair(s) 5133, 5162, 7491, 10223, 10952, 83842, 83843

Gene hit At4g19090

 
Sequence (A. th genome BLAST matches underlined) 
>33-K015001-022-036-A05-8409
TTGAGAAAATCCTGTCCAATCTGAGCTCTGGAGATCCTCACTATATTAAAATATCTGGTC
TTGATTTGGATTTTGGATCTTTTTAAACCCCGAGCTCCCATGTTACTCACTTGTTAAGCA
AACGGCGTATATGTGGTGTGATCTGCATGGTCTCCATGAGACTCCTCTAAATAAAAGGGC
TATGGGATCCTACATAAAAAGAGGTTTTTTGTTCAGGACCCATGCATTTTTTCCATTTAA
GGTCCCTGAACCTGAGGACCCAATTGAGAAACCTGTCAAACCTGGAATCTTTCTTATCCA
CCTCCTCCTTAGGCTTCGCTAATTTATGGGATCCTCCCT
GenBank Accession AL763335 [GenBank]
Graphic View Graphic view of gene At4g19090
Predicted Position of Insertion Chr4:10449854 - go to primer design
BLAST e Value 8e-30
Hit Clone Code (BAC ID) F13C5
Hit Gene Code At4g19090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein, putative (DUF594)
Insertion Classification 5' region
Confirmation Status unknown

Gene hit At1g60470

 
Sequence (A. th genome BLAST matches underlined) 
>33-K015005-022-036-A05-8409
TTGCCGATCCCTTTGGTATACAATCTGGTTTTGGCTATGCTTTGGCGTCACCCGGAGAAC
GTGGAGCTGGAGAAAGTCAAAGTTGTTCACTACTGTGCAGCTGTAAGTAGTTCTGTCTTT
GCTTTGAAACCCTGAGCCCCTTAAGCTTGTTGCTGAAATTTGATTCCTTTTTTCTGTTGA
TAGGGATCCAAGCCATGGAGATACACAGGAGAAGAAGCTAACATGGACAGAGAAGACATC
AAGATGTTAGTTGATAAATGGGGGGATGTCTATAATGATGAATCTCTCGATTTCAAATCG
AAAATCCCTGCAGATGCGGAAGAAACCGTTACAAAATCAAGCATCCTATGGGATCCT
GenBank Accession AL763336 [GenBank]
Graphic View Graphic view of gene At1g60470
Predicted Position of Insertion Chr1:22279579 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F8A5
Hit Gene Code At1g60470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation galactinol synthase 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37