SimpleSearch - Line and FST details


Line specific information

 
Line ID 038G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N403632)
Segregation Analysis 50:35:27
Confirmed for Hit At3g14225
Parent of DUPLO pair none
Parent of pair(s) 4047, 4090, 97124, 97126
Note

Gene hit At3g14225

 
Sequence (A. th genome BLAST matches underlined) 
>63-K015223-022-038-G08-8409
NTGATCCATGTAGGATTTCCCGGACATGAAGGCCTTTACAAAGTCGAAAGATTGGGGAAC
ACAGTTAAACAACTTCAAGAACGTGGAGAAAACGTTGAGGTCTAATTTAGGAGATGCAGA
GGCGAGGAGAGTAATCTCGAAAGCTGTTTATCTTTTTACATAGGAGCAAATGACTATCAA
TACCCATTCTTTGCAAATACCTCAACTTTTAGGAACACTACCAAAGAAAGATTCATCGAT
TTCGTCATCGGCAACACAACGACTGTAATCGAGGTAAGTAACTGGTTTTGTCAACTAAAA
GCAGAGAGGAATAGAACCTTTGATTATGTATGATAAAAATGTGAAATCTTTCTTTTCAGG
AGTTGTATAAATTAGGAGCAAGGAAATTCGGATTCTTGAGCTTGGGTCCATTTGGTTGTA
CACCAAGCGCATTGATAATAAACAGTACAAAGATAGGATCTTGTTTCGAGCCAGTCACAG
AGCTGATCAATCTCCATAACCAAGAATTTCCAAAAGTCTTGAGGCGTCTATGGGATCCTC
GenBank Accession AL763645 [GenBank]
Graphic View Graphic view of gene At3g14225
Predicted Position of Insertion Chr3:4735432 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MLE3
Hit Gene Code At3g14225 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDSL-motif lipase 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL763644 [GenBank]

Gene hit At5g50360

 
Sequence (A. th genome BLAST matches underlined) 
>63-K030252-022-038-G08-8409
TGGGATTTGTCATCCAGGCCGGATCGGATAGCTTGTTAACGTCGTGTATGGGATCCTCGC
TATCGTGAGTAAATCTGTCTGATAACGTCTGTTATAACTAGCTCCGTCATTAAAACTCAG
CCACAACGCCGCCGCACCTAACTCCGGCGCCGCCTTAGCCTTCAACGGCGAGTCTTTCTT
CTCAGGAGTCTCTGGAAGAAGAGGCAACGTCACGATCTCTCTACCACCACCAGATCCGTT
CTTCGTCTCATCGTTTCTCTGTCGTTTGCTGTTACCGTTACTATTAACGGATCCGGTATG
GGATCCTCCCTATAGTGAGACNTANTANNCNNNTCNNTTTNNANNNAGGACGGACTACTA
TAGGCGAGATCCAAGAGCGCATGAAAAAGAGGAAAATGTAAAAAGGA
GenBank Accession CR934239 [GenBank]
Graphic View Graphic view of gene At5g50360
Predicted Position of Insertion Chr5:20505801 - go to primer design
BLAST e Value 2e-124
Hit Clone Code (BAC ID) MXI22
Hit Gene Code At5g50360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation von willebrand factor A domain protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 160F01
Other FSTs Supporting this Hit CR934240 [GenBank]


Last Updated on 10.06.2021 13:37