SimpleSearch - Line and FST details


Line specific information

 
Line ID 039D08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair 12116
Parent of pair(s) none
Note

Gene hit At1g56570

 
Sequence (A. th genome BLAST matches underlined) 
>60-K030253-022-039-D08-8409
CCGGGTTTACGCATTTGGGTGATGGCATTGGCGGTTTAAAGATGTATGGGATCCTCCCTA
TAGTGAGTCGTATTACTCACTCTCTTTTTCTTTTTCCCCTTCGGACATCTCTGTTTTCCT
CCTGATTTGGGTTTTTTTTTTGCTTTTTTTTTTGGGTGGGGGGGGGAGNNNANCTNNNTG
TCANNNNNNNNTNNNNNNNNNNNNNNAANCNNNANNNNNNANNNANNNNNNNANNNNNNN
NNNNNNNNNNNNNNAGNNNNNGGAGCAANGANNNAANGANGGAANNGGGGGAGGGGGGGA
NCAGATCAAAGNNACTGGCGCGGCGGAAGGGCAGGNAAAAGAACGGCAGGAGGAAGCAGC
AATAA
GenBank Accession CR934289 [GenBank]
Graphic View Graphic view of gene At1g56570
Predicted Position of Insertion Chr1:21196347 - go to primer design
BLAST e Value 2e-17
Hit Clone Code (BAC ID) F25P12
Hit Gene Code At1g56570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 164A09

Gene hit At5g23150

 
Sequence (A. th genome BLAST matches underlined) 
>60-K015224-022-039-D08-8409
TGATCCATGTAGAAGTTTGGTTTACTGTTGTCGGCGTTTTTTCCCCTTTAATTTCCTTTT
TCACCAGGAGAGATCGAAATCGAAAAAGGTTTTTCCTTATTTTCCAATTTACCTTATTTT
GTAGTTTAATCTCACTACTCCTAAGTCTCAACCAAATATATTATTAAGTCATTGGGTCAT
TTATGTCCTCTTTTCTTGTTTACACTTTCCTACACGTTTCCATTTATACTTTTAAAAAAA
AGGAAAAAAAAATCATGTTTTCCATTTTTACACATTATAGAACCAACAAAATCATATAAA
CATGTAAACCATAGGATAAATTAACAATTCTGCTATGGGATCCTCCC
GenBank Accession AL763689 [GenBank]
Graphic View Graphic view of gene At5g23150
Predicted Position of Insertion Chr5:7785856 - go to primer design
BLAST e Value 2e-141
Hit Clone Code (BAC ID) MYJ24
Hit Gene Code At5g23150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tudor/PWWP/MBT domain-containing protein
Insertion Classification TS2TE (5')
Confirmation Status unknown
Other FSTs Supporting this Hit AL763688 [GenBank]


Last Updated on 10.06.2021 13:37