SimpleSearch - Line and FST details


Line specific information

 
Line ID 040C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N403777)
Segregation Analysis 50:49:38
Confirmed for Hit At3g60400
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g14810

 
Sequence (A. th genome BLAST matches underlined) 
>67-K030254-022-040-C09-8409
CTGATAGTTAAACCGAAGGCGGGAAACGACAATCTGATCCCCGGGTATGGGATCCTCCCT
ATAGTGAGTCGTATTACTCATTTTGTTTTTAGAATACCGCTTGAGGACATCTATGTAAAC
ATCTTAATATAGAAATGTAAATAACACTTGATTTATGTCTTTCTCAGAATGAAATAGTTA
AAGAGAACAAAATTCAAAAGAAGTAAAGAGAAAGATACTCTCATAGTCTCATGTGTCAGT
TTTTGCGTGCCTACTCTGAAAAAAAGTTATGATTATATCTTCACCAAATACTTTCTAAAA
CAAATTTTAATAAGAAACNAGTGAAGTTTGGTGTGTAAAATAA
GenBank Accession CR934384 [GenBank]
Graphic View Graphic view of gene At2g14810
Predicted Position of Insertion Chr2:6357252 - go to primer design
BLAST e Value 5e-76
Hit Clone Code (BAC ID) F26C24
Hit Gene Code At2g14810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification 3' region
Confirmation Status unknown
Other FSTs Supporting this Hit CR934384 [GenBank]

Gene hit At3g60400

 
Sequence (A. th genome BLAST matches underlined) 
>67-K028793-022-040-C09-8409
CTGATAGTTTAACCGACGGCGGTCACCGACTATCTGATCCCCGGGTTATGGGATCCTCCC
TATTGGTGAGTCTGATTCCTCCCTGAACAAAAAGACTCTTTGTATCTTGCCCCCTATGGA
ATCCATGTATTCTCCCCTCTCGCCACAGAGGAACCTTACTTTATCTTGTATGCTATGTGG
TTTCTGATTCAGGATCTTTGGTGCTGATCTTAACGACATGCATATCGTTGAGAAGGAGAT
GCCGCTGATTTAGAAAATGAAGAATCAGTCGTAGAGTTTTACGAGCATGAAGAGTCATGA
CGAAGAGTGAGAAGAGAGAAGGAAAGAGGACTGGAAGAGGGTCTACAATAGGGAGAATAG
GAACGCGCGTTATAGAAGGAGTTGATGGGTACCTAAATGAAGGAAAGTAGGGGCAGGTAC
GAGAAGCAAGATCGGAATGGGGGAAAAGATTGAGGTGAGGTGAAAACTAGAAGAGA
GenBank Accession CR934383 [GenBank]
Graphic View Graphic view of gene At3g60400
Predicted Position of Insertion Chr3:22330650 - go to primer design
BLAST e Value 9e-38
Hit Clone Code (BAC ID) T8B10
Hit Gene Code At3g60400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Mitochondrial transcription termination factor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37