SimpleSearch - Line and FST details


Line specific information

 
Line ID 041D08
Vector Used pAC161
Line Availability available as T3 set from NASC (N403884)
Segregation Analysis 50:50:34
Confirmed for Hit At4g15230
Parent of DUPLO pair none
Parent of pair(s) 73614, 73622, 73635, 73636, 73637, 73638, 73639, 73640, 73641, 73642, 73643, 73644, 73645, 73646

Gene hit At4g15230

 
Sequence (A. th genome BLAST matches underlined) 
>60-K015219-022-041-D08-8409
NTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATACTCACATGTA
AACTTGTGCTTTGTTTGAGAATTTAGTATCTCAAAACATTCACACTGATCTTAAACAATG
AGTTTACCTGAGGAGTTTCAATATAATACTGCACGTTTTGAAATGTGACAGTGAGTGGCT
TAAAAGGCAAGATAATTTTTCCTATGAAAAAGAGACGAAAGATGTGAAAAGATATCTTGT
CATTACGCAAGCCACTGACCTATGGGATCCTCC
GenBank Accession AL763830 [GenBank]
Graphic View Graphic view of gene At4g15230
Predicted Position of Insertion Chr4:8684204 - go to primer design
BLAST e Value 6e-117
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g15230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pleiotropic drug resistance 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g77655

 
Sequence (A. th genome BLAST matches underlined) 
>60-K030576-022-041-D08-8409
CGCACTCATTGCACCTAATGTAAGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAC
CCACTATGAAAACCTCCCCTACCGACATCGCCGTTTACCGGCCGGGAAAAGAAGGGCTNG
AACGGCTCCTTGGAGAANTCGGANNNTTGGAACANTGNANAACAGAAACGGTAGTAAGCN
NAAGACCAAAACCCNACTCATGGGAAACTGGTAGACATAAAAGATCNNAGGTCACCGGAT
TCNTGATTTCAACCTTATCATGANAAATTCGTAAGGATCGTTCCCANAAGAGATCCAAG
GenBank Accession FR801197 [GenBank]
Graphic View Graphic view of gene At1g77655
Predicted Position of Insertion Chr1:29182732 - go to primer design
BLAST e Value 4e-46
Hit Clone Code (BAC ID) T5M16
Hit Gene Code At1g77655 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37