SimpleSearch - Line and FST details
Line specific information
| Line ID | 041E09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N403897) |
| Segregation Analysis | 50:49:44 |
| Confirmed for Hit | At5g55350 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5064, 5141, 10179, 10209, 10236, 11299, 11300, 93926, 93936 |
| Note |
Gene hit At5g55350
| Sequence (A. th genome BLAST matches underlined) | >69-K015226-022-041-E09-8409 CTGATCCATGTAGCATTTCCCGNACATGAAGCACTTTACAATTGAATATATCCTATAATC ATATGGATCCTCTACAAAGGTACCAAAACTTGTGCTTGACGAAACCATAAACAAAAATGC TTCGTCCGCTATGGGATCCTCCCTATACTGAGAGNGAGNNNNNNNNNNNNNNCCNNNNNN NNNNNGGCTNNNNNNGNTNNGGGACCCCCCCTATNNNNGCCNNCCNCCCCCCCCCCNNCC CCCCCCGCCCGCCCCCCGCCCCCCCCCCCCCGCCCCCCCCCCCGCCCCGCCCCCCCNGCG CGCCCCCCCCCCCCCCCCCCCCCCGCCGCGGCCCGCCCCCCCCCCCCCCCCCCCGCCNNC CCCNCCCCCCCCGCCCCCCCCNTCCCCCCCCTTCTCCCCCCCCCCCTCCCTCGTCCCCCC CCCCCCCTCCCCTCCCTCCCCCCCTCCCTCCCCTTTCCCTCCCCCCTCTTCCCGCCCCCT CCCCCCCCCGTTCCGCTTCCTCCCCCCCCCCTCCCCCCCCCCCCCCCCCCTTTTTCGCCC CCCCCCCCCCTTTTTCCCCCTCCCCCCCCCCCCGCCCCCC |
| GenBank Accession | AL763837 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:22442365 - go to primer design |
| BLAST e Value | 2e-12 |
| Hit Clone Code (BAC ID) | MTE17 |
| Hit Gene Code | At5g55350 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | MBOAT (membrane bound O-acyl transferase) family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g47440
| Sequence (A. th genome BLAST matches underlined) | >69-K030576-022-041-E09-8409 CTGAGTAGTGTGTTTGAATTTAGCAGCACGTATGGGTATGCTCCCTAGGGTGAGTCGTAT TACTCATGGTGAGTGTGATTACTCGCTTGCGTAGAGCACTATCGCCGTCCACAGTGAGGT TGCCGCTGGATTTACATGATCACCATAGACGTTCCAAGAGATGTAAACTGACGATGATAA CGCCAACGCATTAGCAATCGCCGGTATTAAAACACCAAACGGACCANACACATCACCAGC CATCAATTTCCCTGATAAGAAGAAACACAGGTTAACGGTTTCTTCTTATTGCAAAAAAGG ATCANACTCATCAAGAAACAGAGTAATTAGTTGAAGACATGACAAAACCAACGGCTGCGA GGACGACGAAAAGGGTTGAAATAACCTCTGATAC |
| GenBank Accession | CT026030 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:17482507 - go to primer design |
| BLAST e Value | 1e-117 |
| Hit Clone Code (BAC ID) | T21L8 |
| Hit Gene Code | At3g47440 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tonoplast intrinsic protein 5;1 |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
| Other FSTs Supporting this Hit | CT026030 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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