SimpleSearch - Line and FST details


Line specific information

 
Line ID 041H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N403927)
Segregation Analysis 100:93:76
Confirmed for Hit At1g29890
Parent of DUPLO pair none
Parent of pair(s) 78472, 78474, 78476
Note

Gene hit At1g29890

 
Sequence (A. th genome BLAST matches underlined) 
>11-K020161-022-041-H03t-8409
AAGCCATTTACATTGAATATATCCTGACTGTAAATGGCTAAACCAGACCTTCCACGTCTA
CACTAATGGCATTTCAGATCTGGACTTGATCGCTACATATGGATCATCGGCATGATATAT
GCATATTTTCATCCCACTGTAATTCCACAACCATGGTGCTTTCATTTTTTCCATATCTCC
TCTCGAAAGACGCAACTAAATATATTGGGGATTTCAGGTAGAAAGATGGATGGAGAAATT
GGAGGAGTGTGATGCTAACAGAAGGATGTCAATCAAGACAAGCATAATAGGAATTTCTTC
ATTCGTGAGTTGTTAGCTTTTCTCGGATTCTGGTTCATCATATATAGTCTTCTCCACAAT
TATTCTGATGTTTGTGTCAAGGTTTCCAAATGTCCAGGCTGGTTACCTTTGGTATGAATA
CATCTACAAGCTGGACAAGGTTACGTACAACAAATATCATCCCTACACATCTTGGATTCC
AATAA
GenBank Accession BX530752 [GenBank]
Graphic View Graphic view of gene At1g29890
Predicted Position of Insertion Chr1:10465946 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F1N18
Hit Gene Code At1g29890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation O-acetyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR801218 [GenBank] FR801218 [GenBank]

Gene hit At3g14640

 
Sequence (A. th genome BLAST matches underlined) 
>24-K015219-022-041-H03-8409
NTGATCCATGTAGATTNTCCCGGACATGAGAGCACTTTACAATTGAATATATCCTATGGG
ATCCTCCCTATAAGTGAGAAAGCTCGAATGCGAATGTGTGTATAATCAACGCCATTGCCA
TCTTTGCCTCTAACATGGCTAAATTCTGGCCGATGCATATCCTCCGTCCCCATGCAAATG
GAAAGAAGGATACTTGGCTCTTTGTTGCCTTTGAAAGACCGTCTTTGAATCTCTCAGGCT
TAAATTCTGCTGCATCAGTACCCCACAACATGGGGTCGCGTTGGACTATCATTATAAGTA
CACTGATCTGAACACCGGCTGGTACTGTCAAGTCACCTATGGGATCCTCCCTTCAGTGAT
GTGGGACATCATATATAGTCTTCTCCACAATTATTCTGATGTTTGTGTCGTGGTTTCCAA
ATGTTCAGGCTGGTTACCTATGGGATCCTCCCTATAGTGAG
GenBank Accession CT026059 [GenBank]
Graphic View Graphic view of gene At3g14640
Predicted Position of Insertion Chr3:4921724 - go to primer design
BLAST e Value 2e-116
Hit Clone Code (BAC ID) MIE1
Hit Gene Code At3g14640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytochrome P450, family 72, subfamily A, polypeptide 10
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 968G03


Last Updated on 10.06.2021 13:37