SimpleSearch - Line and FST details


Line specific information

 
Line ID 042G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N404015)
Segregation Analysis 50:50:35
Confirmed for Hit At5g53300
Parent of DUPLO pair none
Parent of pair(s) 80821, 80832, 80841, 80856, 80870, 80885, 80886, 80887, 80888

Gene hit At5g53300

 
Sequence (A. th genome BLAST matches underlined) 
>55-K026603-022-042-G07-8409
AGGCTTAAAACTCGTTTCATTGTCCTAGTTTCTGGGGTCTGGTTATACTTGTGAAGAAAA
AACTGTCTCTTTGTTTCCTTGTGCTTATGTGGTGTGAGATTGACTTTATCTTTCTGCGTA
AGGAATCCGCCCTACAGCGAGGGCCACGCGCCACTTGTAATAATAACTTTTTTGGATGGG
GGGGGAAAAAAGCCCCCACCTTAATAAAAAAAGGCCGTCTGCCAACGGGATGCGCAATCG
AAGCAAAAAAAGTGGAATTCCACAACAAGTCTTCTAATATTGAACGGCAATCACCCGTAT
GGGAACGAACTTAACAAAATACTATACAATTCCCACAAAGATTTGTTCCAATCCGACTAC
AAAAAGCCCAGCCGCCCTAATATCACCAGACAAACACCGCGGGGGGGGGGCAAAAACACA
ATATTTTCCC
GenBank Accession CR395838 [GenBank]
Graphic View Graphic view of gene At5g53300
Predicted Position of Insertion Chr5:21633685 - go to primer design
BLAST e Value 2e-54
Hit Clone Code (BAC ID) K19E1
Hit Gene Code At5g53300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ubiquitin-conjugating enzyme 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR395838 [GenBank]


Last Updated on 10.06.2021 13:37