SimpleSearch - Line and FST details


Line specific information

 
Line ID 043E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N404084)
Segregation Analysis 50:6:4
Confirmed for Hit At5g51640
Parent of DUPLO pair 2321
Parent of pair(s) none

Gene hit At5g51640

 
Sequence (A. th genome BLAST matches underlined) 
>29-K026786-022-043-E04-8409
ATGAACCATTTACAATTGAATATATCCTGAGCTAAGTGATTGCTTAAGTTTCTCTAATTG
TTGTAGATTAGTGTGCAAATTTATGTGGAGTAAGTTAAGTAGCTATTTAATGATGATTTG
ACTTAATTACTCTTGAAGGATCACTGAGACAAAAAACCAATGCTACTAATTAATGATGCA
TTTAACTCTTAAGTCCTTAATCTGGAATCTTAATGACCTTTGGACTATATAGTTAGGTAT
GGGATCCTCCCTATAGTGAGACNTATTANTCNTCCCTCTTTTTTTTTCTCCCTTACGATA
CGCATGGTATATGTCCGCTCCGTTATTAAAGACAGAAATCCAGCCTATACAAACGAAACT
AACGCAATAGATAGAAGAGCCAATACAATAAAAAAAAATCAAGGGTAGAATAAAAAAATA
AAGACAAA
GenBank Accession CR395905 [GenBank]
Graphic View Graphic view of gene At5g51640
Predicted Position of Insertion Chr5:20976962 - go to primer design
BLAST e Value 1e-113
Hit Clone Code (BAC ID) K17N15
Hit Gene Code At5g51640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation trichome birefringence-like protein (DUF828)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR395906 [GenBank]


Last Updated on 10.06.2021 13:37