SimpleSearch - Line and FST details


Line specific information

 
Line ID 044G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N404212)
Segregation Analysis 50:43:39
Confirmed for Hit At3g17480
Parent of DUPLO pair none
Parent of pair(s) 12685

Gene hit F14I3

 
Sequence (A. th genome BLAST matches underlined) 
>95-K015601-022-044-G12-8409
NTTTGATCCATGTAGACTNTCCCGGACATGAANGCCTTTACAAAAAGTTATTATCTTATT
AATGTATCGATCTGCGTCACTTTTTACACTGGTACAAATTCGGGATTGGAAAAATTTATT
AATTTATAAAGGTTATTAATTGATCGACTATTAATTTATAGAAGTTTAACTGTATGTTAT
AAATATCATCATATACTGTACTTTGGTCACTCTTTCTATTAACTTCTTCTTTTTTTTTAA
AAGAATTTGGAATTATGTCGTAGTGCATGTGAATAAGTGGGGCCTATGGGATCCTCCCT
GenBank Accession AL763964 [GenBank]
Graphic View Graphic view of sequence AL763964 of line 044G12
Predicted Position of Insertion Chr1:18627221 - go to primer design
BLAST e Value 5e-108
Hit Clone Code (BAC ID) F14I3
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g17480

 
Sequence (A. th genome BLAST matches underlined) 
>95-K015474-022-044-G12-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGTACAG
GGTTCATACTCATTGCTGATCCATGTAGATTTCCCGGCAAAAATTGGTAATTACTCTTTC
TTTCTTTTATGGTATCTAGTGTTAGCACTTTCAGTTTGGATCCACTTGGTTTGACCCGTA
CAAGGGTTCCAAACCACGATAGTGCTATGGGATCCTCCCTTNAGTGATGATTTTTAAAAG
AATTTGGAATTATGTCGTANTGCATGTGAATAAGTGGGGGCTATGGGATCCTCCCTATAG
TGAG
GenBank Accession AL763963 [GenBank]
Graphic View Graphic view of gene At3g17480
Predicted Position of Insertion Chr3:5983644 - go to primer design
BLAST e Value 4e-38
Hit Clone Code (BAC ID) MKP6
Hit Gene Code At3g17480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/associated interaction domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL763963 [GenBank]


Last Updated on 10.06.2021 13:37