SimpleSearch - Line and FST details


Line specific information

 
Line ID 045B12
Vector Used pAC161
Line Availability available as T3 set from NASC (N404248)
Segregation Analysis 50:45:37
Confirmed for Hit At5g03530
Parent of DUPLO pair none
Parent of pair(s) 6390, 6392, 7809, 86795

Gene hit At5g03530

 
Sequence (A. th genome BLAST matches underlined) 
>90-K015475-022-045-B12-8409
TGATCCATGTCGATTTCCCGGACTGAAGCCCTTTACAATTGAATATATCCTGAAACATAT
TGACTTTTTTGGTTGGACCCAGTTAGAGTACTTTCTGCCTGATAATCTATGGGATCCTCC
CTATAGTGAGAACAAAAAGAGGGAGTACCCACCAATTTTCTTTCAGTCCAAAAATGC
GenBank Accession AL763993 [GenBank]
Graphic View Graphic view of gene At5g03530
Predicted Position of Insertion Chr5:886728 - go to primer design
BLAST e Value 7e-12
Hit Clone Code (BAC ID) F12E4
Hit Gene Code At5g03530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RAB GTPase homolog C2A
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F3M18

 
Sequence (A. th genome BLAST matches underlined) 
>90-K015502-022-045-B12-8409
AGATTTCCCGGGACTGAGCCTATTGACCTTCTAGCATTGTTCAGCCTATGCATCCTCCTA
TAGTGAGANGGCNNGAAGACTATTACCATTTTGTTATTGAAAAACTA
GenBank Accession FR801289 [GenBank]
Graphic View Graphic view of sequence FR801289 of line 045B12
Predicted Position of Insertion Chr1:10002417 - go to primer design
BLAST e Value 0.001
Hit Clone Code (BAC ID) F3M18
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37