SimpleSearch - Line and FST details


Line specific information

 
Line ID 045E01
Vector Used pAC161
Line Availability available as T3 set from NASC (N404273)
Segregation Analysis 50:49:36
Confirmed for Hit At5g04170
Parent of DUPLO pair none
Parent of pair(s) 2350

Gene hit At5g04170

 
Sequence (A. th genome BLAST matches underlined) 
>05-K015475-022-045-E01-8409
TTTGATCCATGTAGATTATCCCGGACATGAAGCACTTTACATGGGAACGGTGGCGGCCAT
CAACCTCGCCCCGCTCAACCCGTTACTCGTTCGGGCGGAAACAATCCTCCCTACGGATCA
TCAACAACCTCTTCTCCTTACGCTGTACCCTACGGCGCATCTAAACCACAATCATCATCC
TCTTCTGCGCCGACGTACGGATCTTCATCATACGGAGCACCGCCTCCTTCAGCTCCGTAC
GCGCCTTCTCCAGGAGACTACAACAAGCCGCCAAAGGAGAAACCATACGGAGGAGGCTAC
GGAGCTCCACCACCGTCTGGATCTTCAGATTACGGAAGTTACGGCGCTGGACCTCGTCCG
TGACAGCCGTCTGGGCACGGTGGAGGATACGGAGCTACTCCACCGCATGGGGTTTCTGAC
TATGGAAGTTACGGTGGTGCTCCACCTCGTCCAGCGTCTTCTGGTCACGGTGGCGGATAC
GGAGGTTATCCTCCGCAAGCCTCTTATGGAAGTCCTTTTGCTTCTCTGATGCCGTCAGGT
TTTGCTCCGGAGACAAGATGCGAATATAGTGGCTTGCTTTTAAGCTGCAGATCAAAATGG
GAGGGGGCTGTATTGGATGATAAGGGAGCTTCAAGGAGCTCTGTCTTCTTATAAACGGAG
AATCAGTATGAGAACTGGGCATCTTCTTTATGGACCCATGGCACAAATAGCAATGCTTAT
GAAAACGGGGGGAGTTTCTGGAGGAGTTGGCCCAAATTTGCTTTAAAATCAA
GenBank Accession AL764021 [GenBank]
Graphic View Graphic view of gene At5g04170
Predicted Position of Insertion Chr5:1145634 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F21E1
Hit Gene Code At5g04170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-binding EF-hand family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37