SimpleSearch - Line and FST details
Line specific information
| Line ID | 045H01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N404309) |
| Segregation Analysis | 50:42:37 |
| Confirmed for Hit | At1g70700 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
| Note |
Gene hit At1g70700
| Sequence (A. th genome BLAST matches underlined) | >08-K015502-022-045-H01-8409 NTGATCCATGTAGCATTTCCCGGACCTGAAGCACTTTACAATTGAATATACTCCTGCAAA AAAGCAATTTTCGAGTTTATACACTATGATTTGAGGAAGCAAAAATCTTGATTATATTTT GTTTTGATGTTGATATTATACACACATACCTGAAGGAATCGTGTTACGAGGAGCTGCATT GAATGATTCGATCATGCTCATTGCATTAGTCGCAGCAACGGGTGTGTCCCTACACCTTGA GAAATTATCAGTGTGAGTGGCAAAGCTTGATGAGGTAGCAGCAGTGTTATGGATTTGCTT TACATACATTCTTTCAGCTTCTCGAACCGGTTGGCTATCTGCAGTTTCACCTTTCAAACC GTTCCCGGCGCATAACATGATGGCTTGAGCCTACTCACATATCATGAATAGTCCGTTTTA GAACATGTAAATGTTATGTAAATGTTATTTGTATGAATCTTGATTATATATACCTTATCG GGAGATATGTCATTAAAGACGCTTATAGTTCCGCCATAAAAGATTTNNGAGCTGAGGAGA TGATCCGGAGGAAGCCACTCTGTTTCCACAAACCCACATAACCAAATCAAAATATGAAAA GAGCAAAAAAATTGTTGAATGTTTTTGCATCATAATATGGAAATTACCGTGGAACAAGAG AAAGATGAGTTGGTAAAGGAACTGAACCGCCTATGGGATCTC |
| GenBank Accession | AL764057 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:26656569 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F5A18 |
| Hit Gene Code | At1g70700 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | TIFY domain/Divergent CCT motif family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g23810
| Sequence (A. th genome BLAST matches underlined) | >08-K015475-022-045-H01-8409 TTGATCCATGTAGAATTTCCGGGACATGAAGCCTTTACAATTGACAACCGTCTTTGATAA TAGACAGGACGATCTGAAACTCGGGATTATCAGTAGAGGTCGGGTCAGGGAACGTACCAT TCTTGGCAAAGATCTCTTCAGCTCTAACTCCTTCATGGATCAACAGCGTATCATCACCAC CGTCATCAACGATGAGATCAGGACCACCTCCAGGACCCCAGTCAAGAGCTCTGTCTGTAC CCCACCAATATTGTTGACGACCTCACCCTTCCC |
| GenBank Accession | AL764056 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:8589120 - go to primer design |
| BLAST e Value | 2e-101 |
| Hit Clone Code (BAC ID) | MYM9 |
| Hit Gene Code | At3g23810 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | S-adenosyl-l-homocysteine (SAH) hydrolase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
|
Last Updated on 10.06.2021 13:37 |
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