SimpleSearch - Line and FST details
Line specific information
| Line ID | 046D04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N404360) |
| Segregation Analysis | 100:97:95 |
| Confirmed for Hit | At1g14530 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3058, 3059 |
Gene hit At1g14530
| Sequence (A. th genome BLAST matches underlined) | >49-K029745-022-046-D04C-8409 TCTCCATATTGACCATCATACTCATTGCTGATCCATGTAGATTTCCCGGACATGAAGCCA TTTACAATTGTGAAGAAACTTGGCCTCAGTCCATCAGTCGATACAGCACGTGCCTGCCAA GATAGAGTAAATATCAACAACAATGCAGGAAAAACTAAATTGAAAATATATACAGAATCA AGGTTTACCTGGTAGTAAATCTCTGCCCAAAAGAGAACCAGAAGCGCATATGTAGTGAAG AAAGCAAGACTTGGAATATCAAGTAAGATATGTTGCAGAATCTACAAGAAAAACCGAACG ATACTTGCAAGTTTAGAAATTTCAAATAGACCATCAATGAGGCTAAATCACAATATCAAT AGAAACACCAAACCTCTGGCTGCATGTTCTGTGCATCTCGCCGGAAGAGAAAAACCAG |
| GenBank Accession | HG968639 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4972726 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F14L17 |
| Hit Gene Code | At1g14530 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tobamovirus multiplication-like protein (DUF1084) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | HG968639 [GenBank] |
Gene hit K8K14
| Sequence (A. th genome BLAST matches underlined) | >28-K016080-022-046-D04-8409 TCTGGGATCTCCCTATGGGATCCTCCCTATAGTGAGACGTCACCGCGAGCGTCACATATT GTCGCTCAAGATCGTGGCGTTGGGCTTGTCGGCCGTTGCTGTCGTAATGATATCGGCACC TTCGACCGCCTGTTCCGCAGAGGTGCAGGCCTCGATCTGAAACCCGAACCGCTGGAGATT GCGGGAGCAGCGAGCAGTAACCTCGGGGTCGATGTCGTAAAGTCGTATCCGATCGACGCC GATCATCGCCTTGAAGGCCAAAGCCTGGAACTCACTTTGGGCACCGTTGGCGATCAGCGC CATCGTGCGCGAATCTTTACGGGCCAGATACTTTGCCGCGATCGCGGAGGTCGCGGTCGT TCGCAAGGCCGGCAGGATTGTCATTTCCGACAGCAGCAGCGGATAGCCGCTATCGACATC GGAGAGCACGCCGAACGCGGGTACCTATGGGATCCCCCCAATAGTGAGCAAAGCAAGTGG ATTGATGTGATATCTCCACTGACGTAAGGGATGACGCACAATCCCACTATCCTTCGCAAG ACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCA GATTGTCGTTTCCCGCCTTCGGTTTAACTATCAGTGTTTGAACTACTAACCCACGATTCT AACTTCTATCGTATTTTATAGTTGCCCAGAACTATAAAATACGATAGAAGTTAGAATCGT GGGTTAGTAGGTTTTGTATCCGTCCATATTTAATATTTAAGCCGTGATATTCCCGGNAAA TATAGCTATACACGAATCCTA |
| GenBank Accession | AL936174 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:26909331 - go to primer design |
| BLAST e Value | 1e-56 |
| Hit Clone Code (BAC ID) | K8K14 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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