SimpleSearch - Line and FST details


Line specific information

 
Line ID 047A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N404418)
Segregation Analysis 50:45:34
Confirmed for Hit At5g38200
Parent of DUPLO pair none
Parent of pair(s) 67782, 96780

Gene hit At5g38200

 
Sequence (A. th genome BLAST matches underlined) 
>09-K016076-022-047-A02-8409
TATCCTGAAATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTGCCGCCGCTGCC
GCTTTGCACCCGGTGGAGCTTGCATGTTGGTTTCTACGCAGAACTGAGCCGGTTAGGCAG
ATAATTTCCATGCCGCTTTACTTTGTGAAGGAGAAGATATTGATCCTTCTCTTTATGAAT
CTGAAATATCTTCTCTTTCTCCTGAAGAGCTTCAAGAGATTAGAGAAACACATGCTATGG
GATCCTCCCCTATAGTGAGACNATTTTAANCCAAAAAAAAACAGACCCATGCATGATTAA
GACAAAAAAAACCCAAACAAGAGGGTCGAGTTTTGTTTTGTCATACCCAACGAAATCGAC
AAATTTGTTTTTACAAACGGCGATCTTATGGGAT
GenBank Accession AL936231 [GenBank]
Graphic View Graphic view of gene At5g38200
Predicted Position of Insertion Chr5:15256777 - go to primer design
BLAST e Value 4e-50
Hit Clone Code (BAC ID) MXA21
Hit Gene Code At5g38200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Class I glutamine amidotransferase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL936231 [GenBank]


Last Updated on 10.06.2021 13:37