SimpleSearch - Line and FST details


Line specific information

 
Line ID 047B07
Vector Used pAC161
Line Availability available as T3 set from NASC (N404435)
Segregation Analysis 50:31:24
Confirmed for Hit At1g58807
Parent of DUPLO pair none
Parent of pair(s) 77050, 77053, 77056, 77057, 85183, 85192, 85214, 85215, 85216, 85217, 85218, 85219, 85220, 85221, 85222, 85223

Gene hit At1g58807

 
Sequence (A. th genome BLAST matches underlined) 
>50-K016076-022-047-B07-8409
TCATCACATCTAGAGTCTCCGCGGTTATATCACCTCCGACGCTCCTAAAGATGATGCATC
ACCCGTATGGATAGAATGCACACGAAGGAATGAGTGAGGACTTTGTAATATTCTTCTCCT
CCTTCCGACAATCTCTCCTTCCATCTTTCTGATATCTTCAAATTCTTTAATGAATAGATA
AATTGCAGCCCATCCGGAAGCTTCTTTAACTTTGGACAATCATCGATATAGAGAGTATGA
AGAAAGGGCATAGAGCCTTGTTCTACTATCCACTCTTCCCATTCCTCTATGGGATCCTCC
CTTATAGTGAGAANNACCTTANAGACTGTGCTCATCAAAATCATCTTCCCACGGGCACAG
TAAACTTGAGTCGACTCAGCAAGAATCACAGTATAAGGTACGTGTTTTTTTTCACAAGAA
TCTTTAGCTTTGCTAAATTGTTTTTTCTCATAATTAAACTGAGGTCTACATCGTCGGGAG
ATACACTTCGTTGATCTTGATATGAGACCTTTAAAGAAAATGGAAGGCTATCACGAATCA
GACAGGAGGATCACCCGGACGTACCAGGAGATGCTCCAGAAGAAAACAGGAGATCAGCCT
CGGCGCTTCTA
GenBank Accession AL936254 [GenBank]
Graphic View Graphic view of gene At1g58807
Predicted Position of Insertion Chr1:21783793 - go to primer design
BLAST e Value 1e-114
Hit Clone Code (BAC ID) R18I
Hit Gene Code At1g58807 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (CC-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL936254 [GenBank]


Last Updated on 10.06.2021 13:37