SimpleSearch - Line and FST details


Line specific information

 
Line ID 047D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N404453)
Segregation Analysis 50:50:38
Confirmed for Hit At2g43880
Parent of DUPLO pair none
Parent of pair(s) 4481, 9993, 10020, 10903, 92383, 92388, 92389

Gene hit At2g43880

 
Sequence (A. th genome BLAST matches underlined) 
>04-K016081-022-047-D01-8409
GATCATGAGATTCCCGGACATGAGCCATTTACAATTGAATATATCCATGCTGTCGCGACT
ACCTTATACCTAGGGCTATATCATGCCTATGGGATCCTCCCTACTATGTGACGTAGGCTA
TTAAACCACGATAGACCAGCTTACTGGATCGTATTGCACCTCCTGAACGATATGGACTGC
CCACGAAGCCATGCCCTATTATAATTAAATCAAATATTATAACTATGGGATCGCTCACTA
TATGGAGAGATTCCTTGTTTCCTATGGGATCCTCCCTATAGTGAGAGCCCATGACTAC
GenBank Accession AL936272 [GenBank]
Graphic View Graphic view of gene At2g43880
Predicted Position of Insertion Chr2:18173695 - go to primer design
BLAST e Value 6e-12
Hit Clone Code (BAC ID) F18O19
Hit Gene Code At2g43880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectin lyase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL936272 [GenBank]


Last Updated on 10.06.2021 13:37