SimpleSearch - Line and FST details


Line specific information

 
Line ID 049A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N404614)
Segregation Analysis 50:32:21
Confirmed for Hit At5g41750
Parent of DUPLO pair none
Parent of pair(s) 78498, 78525, 78612, 78677, 78794, 78810, 78839, 78848, 78859, 78883, 78911, 78923, 78927, 78938, 78939, 78940

Gene hit At5g41750

 
Sequence (A. th genome BLAST matches underlined) 
>41-K013870-022-049-A06-8409
NAATTGATCCATGTAGACTTTCCTGGACATGAAGCCTTTACAATTGAATATATCCTATTG
TGTAACACAGCGAGAGTGACAAAATATCATATTTATTAAAATCGAATCATTACAAGCACA
AGAAAGAATGACCTAATTCCAACCTGGATTCCTCCCCAGAGCTTGTTGAGCTTGCTGCTT
GGCATACGAATTGTGACGAGATGTTCCGGGTTGAATCTCTGAGGAAGACTTTATCTTGGG
TAATTTTGCCCATGTATTAACCTAGACAGGAGGCATATACTCCATATCATCTGGTATTGG
CAAAGTACCTTCACTATTGAAAGAGTTTTTTTAGATTCTTAGGAATTGGAGATTACGCAT
TCCTTCAGAAGCCCCCCCG
GenBank Accession AL764081 [GenBank]
Graphic View Graphic view of gene At5g41750
Predicted Position of Insertion Chr5:16696186 - go to primer design
BLAST e Value 2e-110
Hit Clone Code (BAC ID) MUF8
Hit Gene Code At5g41750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL764081 [GenBank]


Last Updated on 10.06.2021 13:37