SimpleSearch - Line and FST details


Line specific information

 
Line ID 051A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N404805)
Segregation Analysis 50:43:35
Confirmed for Hit At3g54400
Parent of DUPLO pair none
Parent of pair(s) 2402, 94065

Gene hit MPO12

 
Sequence (A. th genome BLAST matches underlined) 
>33-K012184-022-051-A05-35St
TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG
GTTTAAACTATCAGTGTAAAACCATGGGCCAAAAAACCAAAAAAGTACACACTATAATTA
GTTAGATAATTGGATGTAATTAAAGATAGTACTTTAGATATTGTTCTAATTTTAAGATTT
TGAGATGAGGAGTTATACAATATCAACTTGAGGATAAAATAGACATTTATATTCTTAAAT
TGTAATAAATAATTATGAAATTATAATGATTTATGAGAGCGTTTGTGTTTAAAAGAGAAA
ATTTGACATATTACAACACGTGTCATACATGTCATGAATTTATTTCTGTTAGATAAAATT
TATTTTATTTTCTTGAGCACTGAAGATAGTTTTTTAATAATATATTTAGGGTTGAGTCCA
TTAATACTTGAATTTAAGTACTCAATTGTTTAGACTCAACTATGGGATCCTCCCTAT
GenBank Accession AL753496 [GenBank]
Graphic View Graphic view of sequence AL753496 of line 051A05
Predicted Position of Insertion Chr5:16178660 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MPO12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g54400

 
Sequence (A. th genome BLAST matches underlined) 
>33-K012139-022-051-A5-8409
TAGTAGAGGCTACATTACTGACACCGGCTCAGCCCATGCTCGTGGCTCTTGACACTATGG
GATCCTCCCTATAGTGAGTCTATTTACT
GenBank Accession AL753495 [GenBank]
Graphic View Graphic view of gene At3g54400
Predicted Position of Insertion Chr3:20142410 - go to primer design
BLAST e Value 2e-12
Hit Clone Code (BAC ID) T12E18
Hit Gene Code At3g54400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Eukaryotic aspartyl protease family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37