SimpleSearch - Line and FST details
Line specific information
| Line ID | 052F01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N404957) |
| Segregation Analysis | 50:42:42 |
| Confirmed for Hit | At1g70760 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g70760
| Sequence (A. th genome BLAST matches underlined) | >06-K012303-022-052-F01-8409 NGTTGATCCATGTAGACTTTCCCGTGACATGAAGCCTTTACACTTGAATATATCCTGTGC ATTTCCCGTACGGAGACCGAGGGTTAGATCATGCCTATGGGATCCTACCCTATGCCGAAC CGGCTCATCTCTATGTGTCTGTTGCTCTTGTTTTTGGTTGTGAAGTTTCCTTATCTCTTG AGATTGGCTCTAATGGCAGAGACTTCTATGGGATCCTCCCTATCGTGCAAGACCTTTATT CACTATCGAAACTATGAGACAACAGTGGTCAGTAATCGAAAATCGTTAGTTTTTCAGATT GACCATCCAGCCTTAGCAATAACAGGAGTTAACAACCAGCAGGAATTGAGCAGTGTTGTG CTCGATATCGGGATCATATCCGTTTGGTACTTCCTATGGGATCCTCCCTATAGTGACCCN CCCACANAAAACTACCTAGCCTCTCTTCAATCCACCCCTGTCCCCTCCTTTGTCTAACCT CTCCCTCCCCTCCCTCTCTTCTTCCCGCTGACCAACATCTTATTTATACTACCCTCCCCG CACCCACCCCACACGAACTGTCACCCCACACAACACCCCAACTTCTGTCCTTACCCCCTC CCCACACATTTGACTTACAGTTTTGTTCCGCTACTCTCTTCCTTAGATAATTAATTTATA TCAACATA |
| GenBank Accession | AL753786 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:26687426 - go to primer design |
| BLAST e Value | 2e-89 |
| Hit Clone Code (BAC ID) | F5A18 |
| Hit Gene Code | At1g70760 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | inorganic carbon transport protein-like protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR801520 [GenBank] AL753789 [GenBank] AL753787 [GenBank] |
Gene hit At4g15850
| Sequence (A. th genome BLAST matches underlined) | >06-K012299-022-052-F01-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTGATCGCGATATATGCCGCATAGTTAAACTAAATTCTATGGG ATCCTCCCTATAGTGAGTCGTATTACTCANTGTACTGTAGCTTCCTCAGCACTACAATGG ATTCCTTCGGCTCATACGAACGTTGTTATAGTCAGAACTATCCTGGCCCAATAACTTGTA CTTGACCCGACTCACCCGAGGGATCATCACAGGAGAACTATGCTTCTGATCTCGGTTCGT GAACTTTGGTTTGGTAGGTACCCGTTCTTGAATTATGTCTAAAAGCTTGTCTTCCTTTCT TGGGTGCTTCTGACTCAACCAACTCCTTGAGCTTCTCTA |
| GenBank Accession | FR801516 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:9004716 - go to primer design |
| BLAST e Value | 1e-78 |
| Hit Clone Code (BAC ID) | FCAALL |
| Hit Gene Code | At4g15850 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RNA helicase 1 |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR801518 [GenBank] FR801518 [GenBank] FR801519 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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