SimpleSearch - Line and FST details


Line specific information

 
Line ID 052H04
Vector Used pAC161
Line Availability available as T3 set from NASC (N404984)
Segregation Analysis 50:13:7
Confirmed for Hit At5g23790
Parent of DUPLO pair none
Parent of pair(s) 5107

Gene hit At5g23790

 
Sequence (A. th genome BLAST matches underlined) 
>32-K012456-022-052-H04-35St
TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTTG
GTTTAAACTATCGGGGTTTCCCGCACATACCAACAAGTTTCTTGGAAACCAAGGATGCAG
TGACCGGATTCAGCTTGGACTCAGTCTCGACGAAATTCTTGTAGTCTAAACTCGAATCTT
CGTAAATCTCCCACCACTTCTTCACCAACATATTTATGTCTTCTCGATGCGTATGCTCTT
CAGCTTCATCCACATTTCCAAGGCTTCGAACCCTATAAAATTGATTTTAGATACAAATGG
TTTTAGTAATAAAAATATGTATTTACATATCTGTATAAAAAAAGTTTAAAAAACGAACAT
TAGCACAATAGTGAACAACACTGATTTGGTCAAGGTCAATGTGTTCGGGATGACGCCAAA
GCATATCCATTACGAGGTTGTAGGTCGAAGGGATTGGCTTGTAAATGTCTCTGAAGTATA
TATTCAGAAAGTCCTAACAAAAATAAACAATATTATCAGAGTCCGTAACAAAATATAATA
AAGTCAAATCAAATGATAGAAAATCCGTAAAAAATCGTACCTGCTCGGCAAAATAAGTTG
GAGTGGTGATTTGAACAACACGAAAGAGATCCTCGTAAGTGACAAGATTTGGTCCAAAAA
CCAACTACCGGGGTTGAAATATACCGGCGGGGGGAGCACCTAACTTTCAACAGGCCCAGT
TACCTTTTTAGGTGACTGGTGGCATAACCGATCTTGTTTTGGGGAGTTTTGGACCAAG
GenBank Accession AL753892 [GenBank]
Graphic View Graphic view of gene At5g23790
Predicted Position of Insertion Chr5:8020220 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MRO11
Hit Gene Code At5g23790 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation galactinol synthase 5
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL753889 [GenBank] AL753888 [GenBank] AL753892 [GenBank]


Last Updated on 10.06.2021 13:37