SimpleSearch - Line and FST details


Line specific information

 
Line ID 053F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N405057)
Segregation Analysis 50:45:42
Confirmed for Hit At1g56580
Parent of DUPLO pair none
Parent of pair(s) 8013

Gene hit At1g56580

 
Sequence (A. th genome BLAST matches underlined) 
>38-K012472-022-053-F05-8409
TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGACCAG
GCTCTATTCTGGAGTCCTGGGTACTGCGAAGAGTGCTTGTCCACGTGCCGGCATCCCATA
GTCTACAGTTACATTAGCACCAGACACGCAGGAAAATGGCAAGTGAAAACCATGAAATAG
GACGCGTCTGTATTCTCTATCTTATCATCAGGATTAACATGTACACATGGTATAGAGATG
TAGAAGAGCACATGAGGCTATGGGATCCTCCTATAAGTGANCAAAGAAGCTGGGGCATGC
ACAGAGGCGCACTCTCTCTAATCTTATTAATCTTATCCTTCCAATCATGAATTACTTTCT
GCTATTTGCTGCTTACTTTCCTTTTATCAATAAGATGATACAATTTGAGATTTGGAATTG
ATAGACATCTATAAAAGTCAATATCCTTTCAATACAGCACATTCCGTATGATCTAAAAAC
CTATGAAAAAAACAAAGTTAAGGTTCTTATTGTCTATGGGATCCTCCTAAAAGAGAAANN
NGAGGNNGTGNAGAAAGAAATAGCATCAATTGAAAGGCCGAAAAGGTTAACACATCGTTG
ACCAGACAGATTTAGGAAGACCCANACCCAAACTAATACTATTCCTCTCTATCTG
GenBank Accession FR801695 [GenBank]
Graphic View Graphic view of gene At1g56580
Predicted Position of Insertion Chr1:21198655 - go to primer design
BLAST e Value 6e-80
Hit Clone Code (BAC ID) F25P12
Hit Gene Code At1g56580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant/protein (Protein of unknown function, DUF538)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR801695 [GenBank]


Last Updated on 10.06.2021 13:37