SimpleSearch - Line and FST details
Line specific information
| Line ID | 053G06 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405070) |
| Segregation Analysis | 50:50:43 |
| Confirmed for Hit | At1g35510 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 156, 2879, 97287 |
Gene hit At1g35510
| Sequence (A. th genome BLAST matches underlined) | >47-K012428-022-053-G06-8409 NTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATAAAATTTGTTCCTTTGGCG ATCATCATAGAATCCTACACCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCAAGGC TACGCAGGCCCGCGCCGGCCTCCTGGATGCGCTCGGCAATGTTCATACAAATTGATTGTC TCAGCGTGGCCTTTGTAAAGGTAGCGACGGTGACCTATCAAGAAATGTGGGAAGTTTCCA CCTTGAGTGGATACAAACACTTCACTGTGGAGGCATACTGTGTAATCAAGTGCTGCCAAT CTTGATGAGTGTCCCTACAGTTTCACAAATACAGCAATTTGTTTAGTGAACTATGGGATC CTCCCTATAGTGAGTCGTATTACTC |
| GenBank Accession | AL754225 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:13074489 - go to primer design |
| BLAST e Value | 2e-98 |
| Hit Clone Code (BAC ID) | F15O4 |
| Hit Gene Code | At1g35510 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | O-fucosyltransferase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL754223 [GenBank] AL754225 [GenBank] |
Gene hit At3g19400
| Sequence (A. th genome BLAST matches underlined) | >47-K012298-022-053-G06-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGACATGAAGCCACCAATGTCTGGCATTATTGTACAGATGTTTTTTAC TATCTTACTGGAAGGTTAAGAGAACAAATTTTGTAGTTGATTAAAGTGGATCAGCTTTTC CTTGGTTATTTTGGTTAAATCACCAAACTGTTTTCCTATAGCTTAACACGTTATGTTTTA AACTATGGGATCCTCCCTATAGTGAGTCGATTTACTCAANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCNNNNNNN NNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNCNNTNNNNCNNCTNNNNNN NTNNNNNNNACNNNNNACTNNTTCTTTTTCTCCCCCTCTCNTCCCTNNCCTCCTCTTCNT TCCTATTATCTCTTCCTCTNCCCTCCCCTCTTTTGCTTCCTCCCTCTNTTTAACCCCATG CCCTAACTCCCCTTTTTCCCCNTTCCCTTTCTTTTTTATAAAAAACA |
| GenBank Accession | AL754221 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:6725179 - go to primer design |
| BLAST e Value | 4e-84 |
| Hit Clone Code (BAC ID) | MLD14 |
| Hit Gene Code | At3g19400 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Cysteine proteinases superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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