SimpleSearch - Line and FST details
Line specific information
Line ID | 053G08 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N405072) |
Segregation Analysis | 165:139:107 |
Confirmed for Hit | At1g18150 |
Parent of DUPLO pair | none |
Parent of pair(s) | 2397, 84328 |
Gene hit At1g18150
Sequence (A. th genome BLAST matches underlined) | >63-K012298-022-053-G08-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTCATGAAGACATTACCATTTGGAGCATGATGTCTGTGAAGTGCAGTACTTCTTCCTC CTCCTGCTGCTCCTGGTTTACCTTGATTTTCTTCAAGATGAGCAAATTGCCTTTTAAATC GGTCTACCCCACTGCGCGTAAACAACAAAAAGATTTATCGAGTTCATAACTTTCTGTTTT CAAGACTTATAGTTTCTGTTAACTGTTAATTAGCTAACCTTGGGTACATAAAGCTAAGCT GATCACCACCACGAAGGTATTCCTCCAACATCTGAGGATGATATTCCAATATCTGATATT TACAAAATCCAAAGAAAAGTGATTGTTAGGATCAATGAATAACATTGAAACAAATTCAGA TTAAAGAAAAGGATATATGTAGAAGGCTTTTGTGTTTGTTTGTTACCTCTCGGTAAATTA ATTCTCTGACATCATCTTTAACTAACTTCTTTCTCTCAAAGTCAAATTCAAGCTTTGAAA TTGGCTGTGTTTGTTGGTTCACGCTCTGAATTTGACAAACCACTGAAATATGGATCAGCT ATGGGATCCTCCCTATGTGAGTCGTTTTA |
GenBank Accession | BX649672 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:6245118 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | T10F20 |
Hit Gene Code | At1g18150 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Protein kinase superfamily protein |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Other FSTs Supporting this Hit | FR801716 [GenBank] |
Gene hit At3g32880
Sequence (A. th genome BLAST matches underlined) | >63-K012481-022-053-G08-8409 TATGCATGTTTTTGAAAGACACCGATCCTTTGCGCCTATCCTCTGGAACTCTACCTATGG GACAACTCCCTCAAGACATGCCCTCCCAGATACATGACGCGCCCGAGCCAATTGGGAGCA CGGCCTGATCCTATGGGCATCCTCCCTATAGATGACTGCACGTGCTGTCGAACCTTCAAA AGCTGAAGTCGGCGTTGGGGCTTCCGCTATTGGTCTCGGTGTCGCGGAAATCCTTCTTGG GCGCCACCGATGGCCTTCCTGTAAAGGATCTGGGTCCAACGAGCCTTGCGGCGGAACTTC ACGCGATCGGCAATGGCGCTGACTACGTCCGCACCCACGCGCCTGGAGATCTGCGAAGCG CAATCACCATCTCGGAAACCCTCGCGAAATTTCGCAGTCGCGACGCCAGAGACCGAGGGT TAGATCATGCCTATGGGATCCTCCCTATAGTGA |
GenBank Accession | FR801717 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr3:13405270 - go to primer design |
BLAST e Value | 4e-07 |
Hit Clone Code (BAC ID) | T7B9 |
Hit Gene Code | At3g32880 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | |
Insertion Classification | TS2TE |
Confirmation Status | unknown |
Last Updated on 10.06.2021 13:37 |