SimpleSearch - Line and FST details
Line specific information
| Line ID | 054A02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405090) |
| Segregation Analysis | 50:42:29 |
| Confirmed for Hit | At1g30760 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6583, 6587, 6597, 6603, 8912, 8915, 10692, 38501, 82429, 82430, 82431, 82432, 82433, 82434, 82435, 82436, 82438, 82439, 82440, 82441, 82442, 82443, 82444, 82445, 82446 |
Gene hit At1g30760
| Sequence (A. th genome BLAST matches underlined) | >09-K012357-022-054-A02-8409 NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCATGTCGTT GACGCTGACGGCAAATTCTTGAATCGCGCGGCGATGGGAGAAGACGTTTTCTGGGCGATT CGAGGAGGTGGAGGAGGAAGCTTCGGCGTAATACTTGCCTGGAAAATAAAGCTCGTTCCG GTGCCAGAGATTGTTACGGTGTTTACCGTCACGAGGACGCTTGAGCAAGACGGAACTAAG CTTTTGTACAAGTGGCAACAAGTCGCTGATAAGCTCGACGAAGATCTCTTTATCCGTGTG ATTATTCAGCCGACGAGCAAAACTCCGAAGAGCAAAGAAAGAACTATCTCGACTTCGTAC CAAGGCCAATTTCTCGGCGACGCTAATCGTTTGTTGCAGGTAAAATTAATGGGGTCAAAT TTAAATTTCGTAATATTAGGGGTCTGTTTGTTAATTTATGAAAGTTAATGGTTATGATAA ATTAAGGAAGGAAAGTTTTGATTATGACAATAACAACCCCGGGTTTGTTTGACAGGGTGA TGCAAAGGGAGTTCCCACAGCTTGGACTAACGAAGAAAGATTGTTTAGAGACAAGCTGGA TCAAATCGGTGATGTACATTGCAGGTTTTTCCAAGCACTGCCCCATCAAAAGCTTTACTT GATGGGAAATTCGTTGGTCAAGAATTACTTTCAAGCCAAGTCAGACTATGTGGAAGAGCC AATTC |
| GenBank Accession | AL754294 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:10919341 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T5I8 |
| Hit Gene Code | At1g30760 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | FAD-binding Berberine family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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