SimpleSearch - Line and FST details
Line specific information
| Line ID | 054B01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405101) |
| Segregation Analysis | 50:44:43 |
| Confirmed for Hit | F21M11 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g23960
| Sequence (A. th genome BLAST matches underlined) | >02-K012480-022-054-B01-8409 CTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATGCTGAAACA TGAATTCACGTCACAATACTATATATGATTCATATGTAAAAATATACTGATGTGTTGCGG AGACACAAACCAAACCAGGAGAAAGGGTCCTATGGGATCCTCCCTATAGGGAGTGGATGT CGGACCGGCCGCCAGCCATCCGGACGCGAGGCCTGTATCGCCGGCCGATGAGATCAGACG TATTGCGCCGCTCTTAGACGCCCTGTCCGATCAGATGCACCGTGTTTCAATCGACAGCTT CCAACCGGAAACCCAGCGCTATGCGCTCAAGCGCGGCGTGGGCTACCTGAACGATATCCA AGGATTTCCTGACCCTGCGCTCTATCCCGATATTGCTGAGGCGGACTGCAGGCTGGTGGT TATGCACTCAGCGCAGCGGGATGGCATCGCCACCCGCACCGGTCACCTTCGACCCGAAGA CGCGCTCGACGAGATTGTGCGGTTCTTCGAGGCGCGGGTTTCCGCCTTGCGACGGAGCGG GGTCGCTGCCGACCGGCTCATCCTCGATCCGGGGATGGGATTTTTTCTTGAGCCCCGCAC CAAAAACATCGCTGCACGTGCTGTCGAACCTTCCAAAGCTGAAGTCGGCGTTGGGGGCTT CCCGCTATTGGTCTCGGTGTCGCGGAAATTCTTCTAGGGCCGCAACCGGTGCCCTTCCTG GAAAAGATTTTGGGTCCAGCGAGCCCTTGCGGCGGAACTTCACGCGATCGGCAATGGGGC CTGACTACGTCCGCACCCACGCCCCTGGGAAATTTGCGGAACCGCAATTACCATTTCGGA AACCCCTGCGAAATTTCCCCAGCCCCGACGCCAGAGAACCGAGGTTTGAACATGCCTA |
| GenBank Accession | AL754341 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:8657501 - go to primer design |
| BLAST e Value | 1e-37 |
| Hit Clone Code (BAC ID) | F14O13 |
| Hit Gene Code | At3g23960 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box and associated interaction domains-containing protein |
| Insertion Classification | 5' region |
| Confirmation Status | unknown |
Gene hit F21M11
| Sequence (A. th genome BLAST matches underlined) | >02-K012357-022-054-B01-8409 NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAAACG TGAATTCACATCACAATACTATATATGATTCATATGTAAAAATATAGTGATATGTTGTGG AGACACAAACCAAACCAGGAGAAAGGGTTCTATGGGATCCTCCCTATAGTGAGTCGTATT ACTCAGGGGAAATTGTTTATTTTATTTTATTCTGAAGCCATGAAGGCACGTTGGTTTTAA ACTAATCAAATAAAATAGGTAACAAATCCTCACAAGAACCAGCACTGTAGCTAGCTTAAT TGAATTTCCCTAGTAACCTATGTTATTTATTTTGATGCAAATTTTTATCGTCTTAAGTTA GATATCCTGCATCAGACGTTGATGAAGAATCACTTATAGATTCTACTTGAGATCCACGTA CTCGTCGTGACGATCTTCTATGGGATCCTCCCTATAGTGAGTCG |
| GenBank Accession | AL754338 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:1022130 - go to primer design |
| BLAST e Value | 5e-142 |
| Hit Clone Code (BAC ID) | F21M11 |
| Insertion Classification | Genome Hit |
| Confirmation Status | confirmed, show confirmation sequences |
Gene hit MUA2
| Sequence (A. th genome BLAST matches underlined) | >02-K012301-022-054-B01-8409 ATTGCTATGCATTCCAATTAATTGTGCTTTATACAAAGAAAGAAAAAAATCCAATTCAAA GGAAAAAGGTGGCAGACAAAAGAGTGAAGCAAAGTTGACAATCTGAAGTTGCAAGCGTGA ACATGAAACTGATGTCTTGTCATTTACTCCACACTTTACTATTTTTTTGTTTTGGCTACG AGATGTTATAATCTTTAGCTTTTTAGTGTTTTGGATCAGTCATTAACAATATACTGTATA TGATGATGCCGTAATTTGTAAAATAATACTTATATAAATAAGGATGTATCCGACAAAACA GAAACAGATATCTCTATTCTCTACTCTCTCTATGGGATCCTCCCTATAAGAGACGGNTTN TGACGTTCAGTGCAGNCGTCTTTTGAAAACGACATGTNGGACAAGTTCTAAGTTACGCGA CAGGCTGNCGCCCTGCCCTTTTCCTGGCGTTTTCTTGTCGCGTGTTTTATTCGGATAAAG TAGAATACTTGCGACTAGAACCGGGAGACATTACGCCATGAACAANAACGCCCGCCGTTG GCCTGCTGGGCTATTCCNGNGTAAGCACCGACGACCAGGATTTGACAAACCAAGGGGCCG AACTTGACGGCGGCGGGTGGACCAAGCTGTTTTCCGAGAAAATAACCGGCCCCAGGGCCA ACCCGCCGGAACTGGCCGGGTGTTTGACCCCCTACCCCCTTGGCACGTTGGGACA |
| GenBank Accession | AL754337 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr5:23291142 - go to primer design |
| BLAST e Value | 9e-144 |
| Hit Clone Code (BAC ID) | MUA2 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | AL754339 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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