SimpleSearch - Line and FST details


Line specific information

 
Line ID 054G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N405167)
Segregation Analysis 50:35:25
Confirmed for Hit At1g12070
Parent of DUPLO pair none
Parent of pair(s) 128, 8123, 11115, 72787

Gene hit At1g12070

 
Sequence (A. th genome BLAST matches underlined) 
>55-K012297-022-054-G07-35St
TGACGTAAGGGATGACGCACAATCCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGA
AGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGGTTTCCCGCCTT
CCATCTCCTCAAGCTTTCATCATCCTATGGGATCCTCCCTATAGTGAGTCGTATTACTC
GenBank Accession FR801799 [GenBank]
Graphic View Graphic view of gene At1g12070
Predicted Position of Insertion Chr1:4079805 - go to primer design
BLAST e Value 2e-08
Hit Clone Code (BAC ID) F12F1
Hit Gene Code At1g12070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Immunoglobulin E-set superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR801799 [GenBank]

Gene hit T14L22

 
Sequence (A. th genome BLAST matches underlined) 
>55-K012471-022-054-G07-8409
CTTGATATTACCTTAACAGCTTGGTATACCTTAAGATGATCTGATACTAAACTCTAAACA
TGAATGATTATTACCTTTGCGATAGTTAATGTTAGTGTTAACACGTGATGGTCTTGGTAC
CTAGTTATTACCTTCAGATAAATAGTCTTTCATTGATACTGATTCTTGCTTCCATCATAT
TGTGTGTCATTAGCTATGGGATCCTCCCTATAGCGATATAGCGAACTGCCAGGTATCTCC
GGAAAAAAACATAGGACGCCTTGATCCGAAAACTCGCCTTCGTCTTTGAATCATACGACT
TATATATGCTCGAACAACCTATGGGATCCTCCCTATTCTGAACCCTCAAGGCCGCATGGA
AAACGAGTGCTATGTGTAAAATCATTTTCCTTGCACTCCTCGTTGTCAACTACCCTATGT
GAATGTTGCGCTTTCCGAATCACCATAAAAGATAGATTTGGCCCGTCCCAATGGCTTTAA
ACAATTCCTTGATTTGCGCCGCTCCAAGCTA
GenBank Accession AL754549 [GenBank]
Graphic View Graphic view of sequence AL754549 of line 054G07
Predicted Position of Insertion Chr1:19247408 - go to primer design
BLAST e Value 8e-61
Hit Clone Code (BAC ID) T14L22
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37