SimpleSearch - Line and FST details


Line specific information

 
Line ID 054H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N405175)
Segregation Analysis 50:45:33
Confirmed for Hit At2g25340
Parent of DUPLO pair none
Parent of pair(s) 5025, 5089, 5100

Gene hit At2g25340

 
Sequence (A. th genome BLAST matches underlined) 
>24-K012471-022-054-H03-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACTCTTGAGTATTTACTGACTTG
CGCGGTCATACTCTCAGATCCCTCTGCACGAATCACCTCTACAAACTAAGGGGGAAACGA
ATCTGGTTTTGCGACTCTACTAGTTCGATACCACATAGCGCAATGCGTTATGATGAGCTA
GCTAAGACGGATTCTCTGTACTACTTGGCAACTATGGGAACATGGAAGAGACTATTCTTA
TCACATTGACTCTGCTCGTAAAGGGTGATCCTCATGATCTACACCAAATTCATACCACCT
CCAAGCTCAGGAATCCGGTCTCTGTCTTATAGCCTACACGATGATTAATCTATTCGATCG
TTAACCAAAATAAGGAACAAAACATTGAGTATTATCGTCATCATAGTAACAGACTAAAAG
CTCATAAGACTTACTTCCGGCGTGTTCATCAGCCATACAAAGAACGGTGAGGCCATCAGT
ACGTTGCTACGTGGAAGACGTAACGATCCTGAGAGTATGACACGTGGCTGTCGCCGTTAC
CAGGGATCTTCTCAAGGATCTGCTTCGCGATCGTGCTATGGGATCCTCTATAAAAGGGAC
NCNNCAAATTCGCTGCGATCATGGATTTCTTTGGATGGATTGGCGCACCTTACATCCTCT
GTTTCTAGCTA
GenBank Accession AL754574 [GenBank]
Graphic View Graphic view of gene At2g25340
Predicted Position of Insertion Chr2:10793241 - go to primer design
BLAST e Value 2e-104
Hit Clone Code (BAC ID) T22F11
Hit Gene Code At2g25340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation vesicle-associated membrane protein 712
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL754575 [GenBank] AL754571 [GenBank] AL754573 [GenBank] AL754574 [GenBank]


Last Updated on 10.06.2021 13:37