SimpleSearch - Line and FST details
Line specific information
| Line ID | 055E02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405234) |
| Segregation Analysis | 50:42:40 |
| Confirmed for Hit | At3g01311 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 64899 |
Gene hit At3g01311
| Sequence (A. th genome BLAST matches underlined) | >13-K012383-022-055-E02-35St NAATGGACGTAAGGGACGACGCATANTCCACTATCCTTCGCAGACCCTTCCTCTATATAA GGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCC TTCGGTTTAAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTG AGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTA GCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT ACACTATGGGATCCTCCCTATAGTGAACGAATCATCTGACTGATCATGTATCGATGAATG TTTAGCACTATGGGATCCTCCCTATAGCGCATCCCTTCCCCCCATATCGCAAGTTCCTTA CCTTCTCCTTCTCAATATACTCCTCTGATACATTTCTCCCACCGAGATCATCTCATTCTA TTCCTCTCCTCCACCCTCTTCTATTCGAAACGCCCTTTATCCTCTTTTGCGCTGTCCGAT CCTCCGCACCGGGTTATTACTTCAATGAAAAATAAAAAATTAGTTTTCTCTAGGAAATTA AACATATTACATTAATAACATT |
| GenBank Accession | AL754760 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:103401 - go to primer design |
| BLAST e Value | 3e-14 |
| Hit Clone Code (BAC ID) | T22N4 |
| Hit Gene Code | At3g01311 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | actin cross-linking protein, putative (DUF569) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL754759 [GenBank] AL754760 [GenBank] |
Gene hit T6G21
| Sequence (A. th genome BLAST matches underlined) | >13-K012470-022-055-E02-8409 NTGATCCATGTAGACTTTCCCGGACATGAANGCCTTTACAATTGAACATGTGCTCAATTG AGATACTCTATGATTTCTATCTACAAAAAGAGATGCTGTGAAATACTCAACGAATAACGC TATGGGAGCCTCCCTATTGGGTTCGTATTCGGTCAAAAAGCAAAATTTCTAATATTATCA ATCTATCATAATAGTATATTGCATCTTTATTTTTTTTAATAGAAATATATTATATGTTTT TGTTTACTTTTATTAATGATCACCGCACCCGCTGGTTTACCAGTCATAAAACTCCCGCAA ACGCACCTATTATCAAACGCTTATCCAGTCGTTCAAAACGCTTGATAACGCTTAAAACCG CAACCACCGGTTTCCGCAAACTTCCCGTATACCGGCATCCCACTCCCGTTTAAACCCACG CCGGGCCTTTTATTTCGCTTCTTAACCACAGTTTATTTTCCAGGTTAAAAGGGAAAAAAA CCTTTTAAAGGGCCCGAGGGCCCTTTAATTTTAACCCCAACCCGAAAATTAAACAAATAC CCCCCTAAAAGCGGATGGGGAGAAAAAAAGGGCCCTTTGGGGATTCTAGGGGTTAAAAAA CTTTCCGAAAAAACCCCAAACCCCAAAAAAGGGGGGTTCTTAAAAAAATTATAGGGGAGC CCCCCGTCTTTTCCACAAAAAACTTTTTTTTTTACACCTTTTTTTTAACACCCCTTCTCA TGTGGGAGAAAAATTGGCCCCCAAAAAATAATCTTGAGT |
| GenBank Accession | AL754761 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:7328454 - go to primer design |
| BLAST e Value | 3e-94 |
| Hit Clone Code (BAC ID) | T6G21 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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