SimpleSearch - Line and FST details
Line specific information
| Line ID | 055F02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405246) |
| Segregation Analysis | 50:45:41 |
| Confirmed for Hit | At3g09820 |
| Parent of DUPLO pair | 12152 |
| Parent of pair(s) | none |
Gene hit At3g09820
| Sequence (A. th genome BLAST matches underlined) | >14-K012296-022-055-F02-35St GTGACGAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTGAACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATG TTCAGGAGAAGTGCCTGCCGTAAGCACATCCTAATCTCTCGATCCATTTATTCCATCTTA TAATTGCCTAAACTAATCACTGGCGATATACTGAAAAGCAAGACGCTGCATCTAATGTCT TGCTTGGACCAGGTACATGGACTATATTTTTGGCAATGAGACCGAGGCAAGAACCTTCTC CAGGGTTCACGGCTGGGAGGTAACTGTCGAAATTTCACCCTGTATTGTTTGAAGAAAGAC AGTTTATTAATCTGTTTGGTTATATTTTATACAGACTGATGATGTTGAGCAAATAGCCAT CAAGATGTCCCAGTTACCCAAAGCCTCTGGAACATACAAGAGGACTACTGTGATTACACA AGGCGCAGATCCTGTGGGTGTCGCTGAGGATGGAAAAGTGAAGAAGTACCCAGTCATTCC TTCTCCCAAAGAAGAGCTTGNTGACACCCACGGTGCAGGTATTTTGGTAGGAACTCAGGC CTCACTAACTGCACTTTAACTAAGTCACAGCAGCTCGAATTTGCTACATTCCGTCCTA |
| GenBank Accession | AL754797 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:3013682 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F8A24 |
| Hit Gene Code | At3g09820 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | adenosine kinase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MTO24
| Sequence (A. th genome BLAST matches underlined) | >14-K012300-022-055-F02-8409 TTGTCCATGTAGATTTCCCGGACTGAAGCACTTACAATTGAATTATCCGGACCTGAATCT CACTTGGACAATGTTTGGTGCCTATAGCACTCATAGTCTGACTATGGGACCCTAGGTAGT GTGGGCTATGGGATCCTCCCTATAGTGAGNGGNCCTGTTTGTTTAAGTCAGGGATCGATT CTCTCCATATGTAGAATTGCTTACTTTTATTTTTTTGACTATAAGTATACACATGCTACT TAAGATCTATTTAAAAACCCGGAAGATATCAAATATATAGGATATAGGATACCCTCTCTC TAGGAATTAATCATGAACCTTTCCATAGGTTCAGAGATTTACCAGAAATTATAAAAAAAA ATCAAAGTTTGAACTAACACTTATAAAATATTTATTTCTAACCCGAGAAAAACAGACATT GGCCTAACATGTAAATTTTATTAACAAATAGACGGATAAAGCTATGGGATCCTCCCTATA GTGA |
| GenBank Accession | AL754798 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:11386250 - go to primer design |
| BLAST e Value | 2e-132 |
| Hit Clone Code (BAC ID) | MTO24 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | AL754803 [GenBank] AL754803 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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