SimpleSearch - Line and FST details


Line specific information

 
Line ID 055G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N405265)
Segregation Analysis 50:19:12
Confirmed for Hit At5g22480
Parent of DUPLO pair none
Parent of pair(s) 12780

Gene hit At5g22480

 
Sequence (A. th genome BLAST matches underlined) 
>71-K012426-022-055-G09-8409
NTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATAACAGGATAAAGG
ATAATGTTGAGATTTTGAAGGGAATGTAGAGATTTTGAAGGGCACACTCACTTTCTCTGA
TCTGTGTAACCAACCCTTCAACTGTTGTTACCATTCCACCAAGTGTACCACCAGCTATGG
GATCCTCCCTATAGTGAGTCGTATTACTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCNNTNNNGNNNNNNNNNNNNNNTGTGNNNNNNNTANNNNTNNCCTNTNGGGAGGATG
CCATTGCTGGGGGTACACTCGGTGGAACGCCAACACAGTTGAAGGGCTGGGTACCAAAGC
ATAGAAAGCTGTCGTGCCCTTCAAAAATCTACATTCCTTCAAAACCACCATTATCCTGTA
TACATGTTATGTAATTGTAAATGGCTTCATGGGCGGGACATCTACCTGTGATCACAATGA
GTGTGATGCGTCATATTGGGGGAAAAGAGAAGAGTAAGTTCAATCTTTTTGTTCCTTAGA
AAATGTAGATCTCCGCAGCGGTTATTATAA
GenBank Accession AL754863 [GenBank]
Graphic View Graphic view of gene At5g22480
Predicted Position of Insertion Chr5:7452451 - go to primer design
BLAST e Value 1e-65
Hit Clone Code (BAC ID) MWD9
Hit Gene Code At5g22480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ZPR1 zinc-finger domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL754861 [GenBank] AL754863 [GenBank]


Last Updated on 10.06.2021 13:37