SimpleSearch - Line and FST details
Line specific information
| Line ID | 057E08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405432) |
| Segregation Analysis | 50:47:45 |
| Confirmed for Hit | At3g13930 |
| Parent of DUPLO pair | 2277 |
| Parent of pair(s) | none |
Gene hit At3g13930
| Sequence (A. th genome BLAST matches underlined) | >61-K016085-022-057-E08-8409 CAATTCGAGTCATATACAGGAACTGAGATTTTTCATAATCTCCAGCCTCTAGCTGAGGAA GGTTAATAACTGTATCAAGAGCTCCCTAACCTTGACCACAGGAACGTAGAGCCCATTTTC TGTTTGTACAGCGACATTGATGTTCACATTTTTAAATCTGTACATAAAAGGAGGAAAATA AGAACCAAGAAACTATGGGATCCTCCCTATAGTGAGATCGGATACCCATGGAATCCTCCC GTAGTGAGATGACGATTTACTTGCCATGGTACTAATGTTTTTGTGAATTGCTTGGGAAAG GGCGCTGCTTTTGAATAGGATGAACTTAAAATGGAGAAAAAGAAAAAGTAATTACGCTTT TTTTTTCAATTCAAAA |
| GenBank Accession | AL936630 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:4599501 - go to primer design |
| BLAST e Value | 6e-74 |
| Hit Clone Code (BAC ID) | MDC16 |
| Hit Gene Code | At3g13930 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Dihydrolipoamide acetyltransferase, long form protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g25410
| Sequence (A. th genome BLAST matches underlined) | >61-K016084-022-057-E08-8409 GATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGCATCACTGA TGTTATTTCATCACCAGAATGCATTGACCAGCATTTTTATACAATAGCTGCATGCCTTTT CTTCGCATTAATCTCCCATCCCGCGACTTCTAGATGGAAGCGTTTATATGTTGGATTCTT TTTTTTCTCGGCCCACCAAACGGATTATATAAGAAATGAAAACCATCTGGCTCCCAAGTT ACAAGATTCCGGATCTTCAGGGGATCCCCCCAACACAGGGACTCTCCAGACACATTCTCC TCCATCTCTCTCCACGATGCCATCTCTTGCGCATTTACCACGGGATCCTGTGTTCGATGG GCTCCTATCCCTGTCCAACTGGATCTCTTCGCCTCACAACGCGACCTCGCAGTGGGGGAC TCCTCCAGACGCCGAGATCTCGTCGACTTCCGCCTCTGATCTGACCGTCTATGGCTCGAA CCAAGCTGTGACAGTGCTA |
| GenBank Accession | AL936629 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10814222 - go to primer design |
| BLAST e Value | 2e-42 |
| Hit Clone Code (BAC ID) | T22F11 |
| Hit Gene Code | At2g25410 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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